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Report for CCDS31964.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31964.1 Public Homo sapiens 13 EPSTI1 24 110 108 CCDS HistoryNCBI Gene:94240Re-query CCDS DB by CCDS ID:31964.1Re-query CCDS DB by GeneID:94240See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31964.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313640.11 ENSP00000318982.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000313640.11Link to Ensembl Protein Viewer:ENSP00000318982.7Re-query CCDS DB by Nucleotide ID:ENST00000313640Re-query CCDS DB by Protein ID:ENSP00000318982
Original member Current member NCBI NM_001002264.4 NP_001002264.1 Accepted alive Link to Nucleotide Sequence:NM_001002264.4Link to Protein Sequence:NP_001002264.1Re-query CCDS DB by Nucleotide ID:NM_001002264Re-query CCDS DB by Protein ID:NP_001002264Link to BLAST:NP_001002264.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002264.1 410 Q96J88-3 410 100% 0 0

Chromosomal Locations for CCDS 31964.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 42888250 42888502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42889211 42889242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42895009 42895108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42900310 42900383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42917541 42917624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42919300 42919332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42926336 42926429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42953948 42954021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42963255 42963338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42964066 42964139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42969094 42969177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42970612 42970670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 42991978 42992165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGAACACCCGCAATAGAGTGGTGAACTCCGGGCTCGGCGCCTCCCCTGCCTCCCGCCCGACCCGGGATC
CC
CAGGACCCTTCTGGGCGGCAAGGGGAGCTGAGCCCCGTGGAAGACCAGAGAGAGGGTTTGGAGGCAGC
C
CCTAAGGGCCCTTCGCGGGAGAGCGTCGTGCACGCGGGCCAGAGGCGCACAAGTGCATACACCTTGATA
GCA
CCAAATATAAACCGGAGAAATGAGATACAAAGAATTGCGGAGCAGGAGCTGGCCAACCTGGAGAAGT
GG
AAGGAGCAGAACAGAGCTAAACCGGTTCACCTGGTGCCCAGACGGCTAGGTGGAAGCCAGTCAGAAAC
T
GAAGTCAGACAGAAACAACAACTCCAGCTGATGCAATCTAAATACAAGCAAAAGCTAAAAAGAGAAGAA
TCT
GTAAGAATCAAGAAGGAAGCTGAAGAAGCTGAACTCCAAAAAATGAAGGCAATTCAGAGAGAGAAGA
GC
AATAAACTGGAGGAGAAAAAAAGACTTCAAGAAAACCTTAGAAGAGAAGCATTTAGAGAGCATCAGCA
A
TACAAAACCGCTGAGTTCTTGAGCAAACTGAACACAGAATCGCCAGACAGAAGTGCCTGTCAAAGTGCT
GTT
TGTGGCCCACAATCCTCAACATGGAAACTTCCTATCCTGCCTAGGGATCACAGCTGGGCCAGAAGCT
GG
GCTTACAGAGATTCTCTAAAGGCAGAAGAAAACAGAAAATTGCAAAAGATGAAGGATGAACAACATCA
A
AAGAGTGAATTACTGGAACTGAAACGGCAGCAGCAAGAGCAAGAAAGAGCCAAAATCCACCAGACTGAA
CAC
AGGAGGGTAAATAATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAAT
CT
GGAGGCTGTTGGAATATGAATAGCGGTAACAGCTGGGGTTCTCTATTAGTTTTTTCGAGGCACCTAAG
G
GTATATGAGAAAATATTGACTCCTATCTGGCCTTCATCAACTGACCTCGAAAAGCCTCATGAGATGCTT
TTT
CTTAATGTGATTTTGTTCAGCCTCACTGTTTTTACCTTAATTTCAACTGCCCACACACTTGACCGTG
CA
GTCAGGAGTGACTGGCTTCTCCTTGTCCTCATTTATGCATGTTTGGAGGAGCTGATTCCTGAACTCAT
A
TTTAATCTCTACTGCCAGGGAAATGCTACATTATTTTTCTAA


Translation (410 aa):
MNTRNRVVNSGLGASPASRPTRDPQDPSGRQGELSPVEDQREGLEAAPKGPSRESVVHAGQRRTSAYTLI
A
PNINRRNEIQR
IAEQELANLEKWKEQNRAKPVHLVPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREE
S
VRIKKEAEEAELQKMKAIQREK
SNKLEEKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSA
V
CGPQSSTW
KLPILPRDHSWARSWAYRDSLKAEENRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTE
H
R
RVNNAFLDRLQGKSQPGGLEQSGGCWNMNSGNSWGSLLVFSRHLRVYEKILTPIWPSSTDLEKPHEML
F
LNVILFSLTVFTLISTAHTLDRAVRSDWLLLVLIYACLEELIPELIFNLYCQGNATLFF




Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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