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Report for CCDS32053.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32053.1 Public Homo sapiens 14 THTPA 24 110 108 CCDS HistoryNCBI Gene:79178Re-query CCDS DB by CCDS ID:32053.1Re-query CCDS DB by GeneID:79178See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32053.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288014.7 ENSP00000288014.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000288014.7Link to Ensembl Protein Viewer:ENSP00000288014.6Re-query CCDS DB by Nucleotide ID:ENST00000288014Re-query CCDS DB by Protein ID:ENSP00000288014
Original member Current member EBI ENST00000404535.3 ENSP00000384580.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404535.3Link to Ensembl Protein Viewer:ENSP00000384580.3Re-query CCDS DB by Nucleotide ID:ENST00000404535Re-query CCDS DB by Protein ID:ENSP00000384580
Original member Current member NCBI NM_001126339.3 NP_001119811.1 Accepted alive Link to Nucleotide Sequence:NM_001126339.3Link to Protein Sequence:NP_001119811.1Re-query CCDS DB by Nucleotide ID:NM_001126339Re-query CCDS DB by Protein ID:NP_001119811Link to BLAST:NP_001119811.1
Original member Current member NCBI NM_024328.6 NP_077304.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024328.6Link to Protein Sequence:NP_077304.1Re-query CCDS DB by Nucleotide ID:NM_024328Re-query CCDS DB by Protein ID:NP_077304Link to BLAST:NP_077304.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001119811.1 230 Q9BU02-1 230 100% 0 0
NP_077304.1 230 Q9BU02-1 230 100% 0 0

Chromosomal Locations for CCDS 32053.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 23556758 23557304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23558695 23558840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (693 nt):
ATGGCCCAGGGCTTGATTGAGGTGGAGCGAAAGTTCCTTCCAGGGCCTGGCACAGAGGAGCGGCTGCAGG
AGTTGGGGGGCACCCTGGAGTACCGGGTCACCTTCCGAGACACCTACTATGACACCCCTGAGCTGAGCCT
CATGCAGGCTGACCACTGGCTGCGACGACGAGAGGATAGTGGATGGGAGCTCAAATGTCCTGGAGCAGCA
GGTGTCTTAGGACCCCACACGGAGTATAAGGAACTCACAGCGGAACCTACAATTGTGGCCCAACTCTGTA
AGGTGCTGCGGGCTGACGGCCTGGGGGCTGGAGATGTGGCTGCTGTGCTGGGCCCACTGGGGCTGCAGGA
AGTAGCTAGTTTTGTGACTAAGCGGAGTGCCTGGAAGCTGGTGCTCTTGGGAGCTGATGAAGAGGAGCCA
CAGCTCAGGGTGGACTTGGATACAGCCGACTTTGGCTACGCTGTGGGTGAGGTAGAGGCCCTGGTGCATG
AGGAGGCTGAAGTACCAACTGCCCTAGAGAAGATCCACAGGCTCAGCAGCATGCTTGGTGTGCCTGCACA
GGAGACAGCACCAGCCAAGCTGATTGTGTATCTACAGCGTTTCCGGCCTCAAGACTATCAGCGCCTGCTA
GAAGTGAACAGCTCCAGAGAGAGGCCACAGGAGACTGAAGATCCTGACCACTGCCTGGGCTAG

Translation (230 aa):
MAQGLIEVERKFLPGPGTEERLQELGGTLEYRVTFRDTYYDTPELSLMQADHWLRRREDSGWELKCPGAA
GVLGPHTEYKELTAEPTIVAQLCKVLRADGLGAGDVAAVLGPLGLQEVASFVTKRSAWKLVLLGADEEEP
QLRVDLDTADFGYAVGEVEALVHEEAEVPTALEKIHRLSSMLGVPAQETAPAKLIVYLQRFRPQDYQRLL
EVNSSRERPQETEDPDHCLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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