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Report for CCDS32091.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32091.2 Public Homo sapiens 14 PCNX4 24 110 108 CCDS HistoryNCBI Gene:64430Re-query CCDS DB by CCDS ID:32091.2Re-query CCDS DB by GeneID:64430See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32091.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317623.8 ENSP00000317396.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000317623.8Link to Ensembl Protein Viewer:ENSP00000317396.4Re-query CCDS DB by Nucleotide ID:ENST00000317623Re-query CCDS DB by Protein ID:ENSP00000317396
Original member Current member NCBI NM_022495.5 NP_071940.4 Accepted alive Link to Nucleotide Sequence:NM_022495.5Link to Protein Sequence:NP_071940.4Re-query CCDS DB by Nucleotide ID:NM_022495Re-query CCDS DB by Protein ID:NP_071940Link to BLAST:NP_071940.4

Chromosomal Locations for CCDS 32091.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 60114713 60114879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60114974 60115461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60115719 60115819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60115941 60116060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60118329 60118692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60121196 60121299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60124218 60125251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60125637 60125823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60133970 60134221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2817 nt):
ATGCCAGCTCTAGAACACATGAATCAGATTTTACACATCTTGTTTGTATTTTTACCCTTTCTGTGGGCAC
TTGGGACTCTGCCCCCACCCGATGCACTTCTCTTATGGGCAATGGAGCAGGTTTTAGAGTTCGGCCTTGG
AGGCTCATCTATGTCAACCCACTTACGGTTATTAGTAATGTTCATCATGTCTGCTGGAACAGCTATAGCA
TCATATTTCATTCCAAGCACTGTTGGTGTGGTTCTTTTCATGACTGGATTTGGTTTCTTGCTGAGTCTGA
ACTTAAGTGATATGGGTCACAAAATTGGAACCAAATCTAAGGATTTACCCAGTGGTCCGGAAAAACATTT
TTCATGGAAGGAATGCCTTTTCTACATCATTATATTAGTCTTGGCTCTTTTAGAAACTAGCTTGCTTCAT
CACTTTGCTGGCTTCTCACAGATTTCTAAAAGCAATTCCCAGGCTATTGTGGGCTATGGTTTGATGATAT
TACTTATAATACTGTGGATACTTAGAGAAATTCAAAGCGTATATATCATTGGAATTTTCCGAAATCCCTT
TTATCCGAAGGATGTGCAAACTGTGACTGTATTCTTTGAGAAGCAAACTAGGCTCATGAAGATTGGTATT
GTCAGACGGATTTTGCTAACTTTAGTATCACCTTTTGCCATGATAGCATTTCTTTCATTGGACAGTTCCT
TACAAGGGCTCCACTCAGTGTCTGTCTGTATTGGATTCACAAGAGCCTTTAGAATGGTATGGCAGAATAC
AGAAAATGCTTTATTGGAGACAGTCATTGTATCAACAGTACACTTGATCTCCAGTACAGACATATGGTGG
AACAGAAGCCTGGATACAGGACTCAGACTCTTACTGGTTGGTATCATACGTGATCGTTTGATTCAGTTCA
TCTCTAAATTGCAGTTTGCCGTGACTGTGCTTTTGACATCATGGACAGAGAAAAAACAACGTCGAAAAAC
AACTGCCACTTTATGTATACTCAACATTGTCTTTTCTCCATTCGTGTTGGTCATCATAGTTTTTTCTACA
CTACTCTCTTCTCCCTTACTCCCTCTTTTCACCCTTCCTGTGTTCTTGGTGGGGTTTCCCCGACCTATTC
AGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGTGTGCAGATACAGTGTACTACTACCAAATGGT
GCCCAGGTTGACTGCTGTACTGCAGACTGCAATGGCAGCTGGAAGTTTAGGTCTCCTCCTACCTGGATCT
CATTACTTGGGCCGTTTTCAGGATCGTTTAATGTGGATAATGATTCTGGAATGTGGCTATACTTACTGCT
CTATTAACATTAAGGGGTTAGAATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTTGATGA
AGTTTTTGAAGATGCTTTTGAGCAAGAATACACAAGAGTATGTTCCCTTAATGAACACTTTGGAAATGTC
TTGACACCCTGTACTGTTTTGCCTGTGAAATTGTATTCTGATGCCAGGAATGTTCTATCAGGCATAATTG
ATTCTCATGAAAACTTAAAAGAATTTAAAGGTGACCTCATTAAAGTACTTGTGTGGATACTTGTTCAATA
CTGCTCCAAAAGGCCTGGCATGAAAGAGAATGTTCACAACACTGAAAATAAAGGGAAAGCACCTCTAATG
TTGCCTGCTTTGAACACTTTGCCACCTCCCAAATCCCCAGAAGACATAGACAGTTTAAATTCAGAAACTT
TTAATGACTGGTCTGATGATAATATTTTTGATGATGAGCCAACTATCAAAAAAGTAATAGAAGAAAAACA
TCAGTTGAAAGATTTGCCAGGTACAAATTTGTTTATTCCAGGATCAGTAGAATCACAGAGGGTTGGTGAT
CATTCTACAGGCACTGTTCCTGAAAACGATCTTTACAAAGCAGTTCTATTAGGATACCCTGCTGTTGACA
AAGGAAAACAAGAGGACATGCCATATATTCCTCTCATGGAGTTCAGTTGTTCACATTCTCACTTAGTATG
CTTACCCGCAGAGTGGAGGACTAGCTGTATGCCCAGTTCCAAAATGAAGGAGATGAGCTCGTTATTTCCA
GAAGACTGGTACCAATTTGTTCTAAGGCAGTTGGAATGTTATCATTCAGAAGAGAAGGCCTCAAATGTAC
TGGAAGAAATTGCCAAGGACAAAGTTTTAAAAGACTTTTATGTTCATACAGTAATGACTTGTTATTTTAG
TTTATTTGGAATAGACAATATGGCTCCTAGTCCTGGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCT
TGGTCTGTTGCTTTGGACTGGCTCACAGAAAAGCCAGAACTGTTTCAACTAGCACTGAAAGCATTCAGGT
ATACTCTGAAACTAATGATTGATAAAGCAAGTTTAGGTCCAATAGAAGACTTTAGAGAACTGATTAAGTA
CCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTGGAAGGAAGCAATTTTA
CAAGAAAAGCCATACTTGTTTTCTCTGGGGTATGATTCTAATATGGGAATTTACACTGGGAGAGTGCTTA
GCCTTCAAGAATTATTGATCCAAGTGGGAAAGTTAAATCCTGAAGCTGTTAGAGGTCAGTGGGCCAATCT
TTCATGGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTCATCCACTACTT
TTAAGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCC
ACATACATTTGTATTAG

Translation (938 aa):
MPALEHMNQILHILFVFLPFLWALGTLPPPDALLLWAMEQVLEFGLGGSSMSTHLRLLVMFIMSAGTAIA
SYFIPSTVGVVLFMTGFGFLLSLNLSDMGHKIGTKSKDLPSGPEKHFSWKECLFYIIILVLALLETSLLH
HFAGFSQISKSNSQAIVGYGLMILLIILWILREIQSVYIIGIFRNPFYPKDVQTVTVFFEKQTRLMKIGI
VRRILLTLVSPFAMIAFLSLDSSLQGLHSVSVCIGFTRAFRMVWQNTENALLETVIVSTVHLISSTDIWW
NRSLDTGLRLLLVGIIRDRLIQFISKLQFAVTVLLTSWTEKKQRRKTTATLCILNIVFSPFVLVIIVFST
LLSSPLLPLFTLPVFLVGFPRPIQSWPGAAGTTACVCADTVYYYQMVPRLTAVLQTAMAAGSLGLLLPGS
HYLGRFQDRLMWIMILECGYTYCSINIKGLELQETSCHTAEARRVDEVFEDAFEQEYTRVCSLNEHFGNV
LTPCTVLPVKLYSDARNVLSGIIDSHENLKEFKGDLIKVLVWILVQYCSKRPGMKENVHNTENKGKAPLM
LPALNTLPPPKSPEDIDSLNSETFNDWSDDNIFDDEPTIKKVIEEKHQLKDLPGTNLFIPGSVESQRVGD
HSTGTVPENDLYKAVLLGYPAVDKGKQEDMPYIPLMEFSCSHSHLVCLPAEWRTSCMPSSKMKEMSSLFP
EDWYQFVLRQLECYHSEEKASNVLEEIAKDKVLKDFYVHTVMTCYFSLFGIDNMAPSPGHILRVYGGVLP
WSVALDWLTEKPELFQLALKAFRYTLKLMIDKASLGPIEDFRELIKYLEEYERDWYIGLVSDEKWKEAIL
QEKPYLFSLGYDSNMGIYTGRVLSLQELLIQVGKLNPEAVRGQWANLSWELLYATNDDEERYSIQAHPLL
LRNLTVQAAEPPLGYPIYSSKPLHIHLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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