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Report for CCDS32092.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32092.1 Public Homo sapiens 14 TRMT5 24 110 108 CCDS HistoryNCBI Gene:57570Re-query CCDS DB by CCDS ID:32092.1Re-query CCDS DB by GeneID:57570See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32092.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261249.7 ENSP00000261249.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261249.7Link to Ensembl Protein Viewer:ENSP00000261249.6Re-query CCDS DB by Nucleotide ID:ENST00000261249Re-query CCDS DB by Protein ID:ENSP00000261249
Original member Current member NCBI NM_020810.3 NP_065861.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020810.3Link to Protein Sequence:NP_065861.3Re-query CCDS DB by Nucleotide ID:NM_020810Re-query CCDS DB by Protein ID:NP_065861Link to BLAST:NP_065861.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065861.3 509 Q32P41 509 100% 0 0

Chromosomal Locations for CCDS 32092.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 60975109 60975194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60975475 60976126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60977514 60977638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60979231 60979886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60980963 60980973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1530 nt):
ATGGTGCTTTGGATCTTATGGAGGCCATTTGGATTCTCAGGAAGATTTCTGAAACTGGAAAGCCATAGCA
TAACTGAATCAAAATCGTTGATTCCAGTAGCTTGGACATCCCTGACACAGATGCTTTTGGAAGCACCTGG
TATTTTCTTATTGGGTCAAAGAAAAAGATTCTCAACCATGCCAGAAACAGAAACACATGAGAGAGAGACT
GAATTGTTTTCACCACCTTCTGATGTCCGAGGCATGACAAAACTTGATAGAACAGCTTTTAAAAAGACAG
TCAACATTCCAGTGCTTAAAGTGAGGAAAGAAATAGTCAGTAAATTGATGCGATCCCTAAAAAGGGCAGC
ATTGCAGCGCCCAGGCATAAGACGTGTGATTGAAGATCCGGAAGATAAAGAAAGTAGACTAATCATGTTG
GATCCCTATAAAATATTTACTCATGATTCCTTTGAGAAAGCAGAACTCAGTGTTTTAGAGCAGCTTAATG
TCAGTCCACAGATCTCTAAATACAATTTGGAACTAACATATGAACACTTTAAGTCAGAAGAAATCTTGAG
AGCTGTGCTTCCTGAAGGTCAAGATGTAACTTCAGGGTTTAGCAGGATTGGACATATTGCACACCTAAAC
CTTCGAGATCATCAGCTGCCTTTCAAACATTTAATTGGCCAGGTTATGATTGACAAAAATCCAGGAATCA
CCTCAGCAGTAAATAAAATAAATAATATTGACAATATGTACCGAAATTTCCAAATGGAAGTGCTATCTGG
AGAGCAGAACATGATGACAAAGGTTCGAGAAAACAACTACACCTATGAATTTGATTTTTCAAAAGTCTAT
TGGAATCCTCGTCTGTCTACAGAACACAGCCGTATCACAGAACTTCTCAAACCTGGGGATGTCCTATTTG
ATGTTTTTGCTGGGGTTGGGCCCTTTGCCATTCCAGTAGCAAAGAAAAACTGCACTGTATTTGCCAATGA
TCTCAATCCTGAATCTCATAAATGGCTGTTGTACAACTGTAAATTAAATAAAGTGGACCAAAAGGTGAAA
GTCTTCAACTTGGATGGGAAAGACTTCCTCCAAGGACCAGTCAAAGAAGAGTTAATGCAGCTGCTGGGTC
TGTCAAAAGAAAGAAAACCCTCTGTGCACGTTGTCATGAACTTGCCAGCAAAAGCTATAGAGTTTCTTAG
TGCTTTCAAGTGGCTTTTAGATGGGCAGCCATGCAGCAGTGAGTTCCTTCCCATAGTGCATTGTTATAGC
TTTTCCAAAGATGCTAACCCTGCTGAGGATGTTCGGCAAAGGGCTGGAGCTGTGTTAGGCATTTCTCTGG
AGGCATGCAGTTCAGTTCACCTGGTAAGAAATGTGGCCCCAAACAAGGAAATGCTGTGCATCACGTTTCA
GATTCCTGCCTCTGTCCTCTACAAGAACCAGACCAGAAATCCAGAGAATCATGAAGATCCACCTCTTAAA
AGGCAGAGGACGGCTGAAGCCTTTTCAGACGAAAAAACACAAATTGTTTCAAACACTTAA

Translation (509 aa):
MVLWILWRPFGFSGRFLKLESHSITESKSLIPVAWTSLTQMLLEAPGIFLLGQRKRFSTMPETETHERET
ELFSPPSDVRGMTKLDRTAFKKTVNIPVLKVRKEIVSKLMRSLKRAALQRPGIRRVIEDPEDKESRLIML
DPYKIFTHDSFEKAELSVLEQLNVSPQISKYNLELTYEHFKSEEILRAVLPEGQDVTSGFSRIGHIAHLN
LRDHQLPFKHLIGQVMIDKNPGITSAVNKINNIDNMYRNFQMEVLSGEQNMMTKVRENNYTYEFDFSKVY
WNPRLSTEHSRITELLKPGDVLFDVFAGVGPFAIPVAKKNCTVFANDLNPESHKWLLYNCKLNKVDQKVK
VFNLDGKDFLQGPVKEELMQLLGLSKERKPSVHVVMNLPAKAIEFLSAFKWLLDGQPCSSEFLPIVHCYS
FSKDANPAEDVRQRAGAVLGISLEACSSVHLVRNVAPNKEMLCITFQIPASVLYKNQTRNPENHEDPPLK
RQRTAEAFSDEKTQIVSNT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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