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Report for CCDS32230.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32230.1 Public Homo sapiens 15 MYEF2 24 110 108 CCDS HistoryNCBI Gene:50804Re-query CCDS DB by CCDS ID:32230.1Re-query CCDS DB by GeneID:50804See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32230.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324324.12 ENSP00000316950.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324324.12Link to Ensembl Protein Viewer:ENSP00000316950.7Re-query CCDS DB by Nucleotide ID:ENST00000324324Re-query CCDS DB by Protein ID:ENSP00000316950
Original member Current member NCBI NM_016132.5 NP_057216.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016132.5Link to Protein Sequence:NP_057216.3Re-query CCDS DB by Nucleotide ID:NM_016132Re-query CCDS DB by Protein ID:NP_057216Link to BLAST:NP_057216.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057216.3 600 Q9P2K5-1 600 99.8333% 0 1

Chromosomal Locations for CCDS 32230.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 48142908 48143071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48149032 48149083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48149163 48149371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48151100 48151171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48151473 48151571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48151874 48151942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48152234 48152284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48153792 48153893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48157993 48158056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48158175 48158224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48158769 48158922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48159613 48159804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48165933 48166026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48166121 48166128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48167349 48167401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48168631 48168839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 48178077 48178237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1803 nt):
ATGGCGGACGCCAACAAGGCCGAGGTGCCCGGGGCCACTGGTGGCGACAGCCCGCACCTGCAGCCCGCAG
AGCCGCCGGGCGAGCCGCGGCGAGAGCCGCACCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAG
CAGCTCCAATGGCGTTAAAATGGAGAATGATGAATCAGCAAAAGAAGAGAAATCTGACTTAAAGGAAAAA
TCTACAGGAAGTAAGAAGGCCAATAGATTTCATCCTTATTCAAAAGACAAGAATTCGGGCGCTGGAGAAA
AGAAGGGTCCAAATCGTAACAGAGTTTTCATTAGCAACATCCCATATGACATGAAATGGCAAGCTATTAA
AGATCTAATGAGAGAGAAAGTTGGTGAGGTTACATACGTGGAGCTCTTTAAGGATGCGGAAGGAAAATCA
AGGGGTTGTGGTGTGGTTGAATTCAAAGATGAAGAATTTGTAAAGAAAGCCCTAGAAACTATGAACAAAT
ATGATCTTAGTGGAAGACCCCTTAATATTAAAGAGGATCCTGATGGAGAAAATGCTCGTAGGGCATTGCA
GCGAACAGGAGGATCATTTCCAGGAGGACACGTCCCTGATATGGGATCAGGGTTGATGAATTTACCACCT
TCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGGTTCCA
CAATTTTTGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGAAGCTAAAGGAAGTGTTCAGCATAGCTGG
AACTGTGAAGCGGGCAGATATTAAAGAAGACAAAGATGGCAAGAGCAGAGGAATGGGCACTGTCACTTTT
GAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTTTTATTTGATAGACCTATGC
ATGTGAAAATGGATGACAAGTCTGTTCCTCATGAAGAGTACCGTTCACATGATGGTAAAACACCACAATT
ACCACGTGGTCTTGGAGGCATTGGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTG
AACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTATGGGAATGGATGGTCCAGGTTTTGGAGGAA
TGAATAGAATTGGAGGAGGAATAGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGGAGGATTTGGAGG
AGTTGGCCGAATGGGAGAGCTGTACCGTGGTGCGATGACTAGTAGCATGGAGCGAGATTTTGGACGTGGT
GATATTGGAATAAATCGAGGCTTTGGAGATTCCTTTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTTG
CAGGAAGAATAGGATCTTCTAACATGGGTCCAGTAGGATCTGGAATAAGTGGTGGAATGGGTAGCATGAA
CAGTGTGACTGGAGGAATGGGGATGGGACTGGACCGGATGAGTTCCAGCTTTGATAGAATGGGACCAGGT
ATAGGAGCTATACTGGAAAGGAGCATCGATATGGATCGAGGATTTTTATCGGGTCCAATGGGAAGCGGAA
TGAGAGAGAGAATAGGCTCCAAAGGCAACCAGATATTTGTCAGAAATCTACCTTTTGACTTGACTTGGCA
GAAACTAAAAGAGAAATTCAGTCAGTGTGGTCATGTAATGTTTGCAGAAATAAAAATGGAGAATGGAAAG
TCAAAAGGCTGTGGAACAGTCAGATTTGACTCCCCAGAATCAGCTGAAAAAGCCTGCAGAATAATGAATG
GCATAAAAATCAGTGGCAGAGAAATTGATGTTCGCTTGGATCGTAATGCATAA

Translation (600 aa):
MADANKAEVPGATGGDSPHLQPAEPPGEPRREPHPAEAEKQQPQHSSSSNGVKMENDESAKEEKSDLKEK
STGSKKANRFHPYSKDKNSGAGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKS
RGCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPP
SILNNPNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTF
EQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEEYRSHDGKTPQLPRGLGGIGMGLGPGGQPISASQL
NIGGVMGNLGPGGMGMDGPGFGGMNRIGGGIGFGGLEAMNSMGGFGGVGRMGELYRGAMTSSMERDFGRG
DIGINRGFGDSFGRLGSAMIGGFAGRIGSSNMGPVGSGISGGMGSMNSVTGGMGMGLDRMSSSFDRMGPG
IGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGK
SKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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