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Report for CCDS32273.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32273.1 Public Homo sapiens 15 IQCH 24 110 108 CCDS HistoryNCBI Gene:64799Re-query CCDS DB by CCDS ID:32273.1Re-query CCDS DB by GeneID:64799See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32273.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335894.9 ENSP00000336861.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335894.9Link to Ensembl Protein Viewer:ENSP00000336861.4Re-query CCDS DB by Nucleotide ID:ENST00000335894Re-query CCDS DB by Protein ID:ENSP00000336861
Original member Current member NCBI NM_001031715.3 NP_001026885.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031715.3Link to Protein Sequence:NP_001026885.2Re-query CCDS DB by Nucleotide ID:NM_001031715Re-query CCDS DB by Protein ID:NP_001026885Link to BLAST:NP_001026885.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026885.2 1027 Q86VS3-1 1027 100% 0 0

Chromosomal Locations for CCDS 32273.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 67254897 67254947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67261272 67261394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67263122 67263216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67279395 67279512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67336975 67337095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67344063 67344191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67357345 67357421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67359847 67359885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67372111 67372662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67373367 67373433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67384936 67385019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67388831 67389006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67395291 67395563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67400114 67400305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67416931 67417051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67421291 67421577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67465127 67465297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67475696 67475818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67490003 67490064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67494258 67494366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67500633 67500746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3084 nt):
ATGGCACAGAACACTGAAAACCACGACCCTGTCGGATCCATCTTAATCCAGATCCATGAAGACCTTTATC
AGTTAAAGGAGAAATTAACAAAATTCTCACCTGAGGAAAAAGGAGAGACTCTAGACATTCAGAGTCTTGA
AACAGCAATCAAAAGGACTGAAGTGGGGTTAAGAATTCACATTGAGAAGTATTTAAATGTTGTAAACCAG
AATGTATTAACGACTTCTGTTAATGATGAGAGCTTATATACTCCCCAGGCTTCCAAATGGTTACTTCCAA
CTGTAATTGATCAGAAATCATTTATTTTCCCTCAGGAATCTGAGGGTACATTTTGGCAACCCCAAAGACA
GCACAGTTCATCTCTGCCTGTCTTTCCAAGAGCAAAGATAAAGGTTTCGAAGTTAATCAAAGGGTCTAAC
ATATCCAGCCTCACGGTTCTGCCATCTTCTCATTGCACAGATCCCTATTTCACTCCTATACCAGTCTTAC
AAGCAGATGCCCACAAAGGGATTTTAAGTATGATAGAACGAGGGCTGATTCCACCAACAGCAAGGATTAC
CTTTCAGAATCCACCCATTACACCCAGAGCAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCA
ACTGTAGCCACTTTCACTATACCTCGGGAACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGA
AACAAAGATCAAAGGGGAAAAGCAGAAGGTCAAGAGGACATCATGATAGGAAGGCCATGAAAGTCAAAAC
ACCTTTGAGAGCCCTGAAATCACTGTGGGATTATGACTTTTTAATTTATGATGGTGTCATAGACAATACA
GCCCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTTAGCTTGGGGAGGTATTTTTTCTCTCTTGGAAC
ACGTCGAGAAGTTTCTCAGGAACTATGCTATACCAGAAGTCAAAATAAAAGGGAATAATTTGGTGGCCCT
CCTTCCAGAGTTTGAGCTGACGAATAAACTTACCAGATATGACCTTCTCTCAGTGTTAGAGGACCCAGCT
CATGTCCAAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCA
TGAAGATCCAAGCCACATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCTTTTATCGCCAGCAGAAGTG
GGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATAAGACTCGACTAAAGAAGATACTAAAG
GAATCACGTCAGAGACACCTGGAGAATTTTCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCA
TCAGGACCTCCAGGAGGACTATTATCCATATCCCATCATTAGGGTATTCCCAGCCTGTGAGAGAACATAT
TGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAGATGCCAATGTGAAT
GTCATCTACATCTGCTCCCATCATATGAATGACGAGTTAGTGCTGTATTACAAAAAAATCCTAAGTCTAC
ATGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTTCAAAATTATCACACC
TGAAGCTGTAAACATCTTCCCTAAGCATCATATGTGCCTGGCCACTCACCTGATGTACAGTCCCAAGGCA
ATCAAAAGAATAAAAAATCTCATCCGAGGAACAGAGGCCTACATCGTCAGCGGGCTCCTCCACAGAGATG
ATTTAGCTGTGGCCGATATGTTAGACATACCCATCCTGGGCTCTGAGCCTGAACTAGCTCATCTTTATAG
TACCAAATCTGGAGGCAAACGTGTCTTTGACAGTGCCAATGTGGCAGTTCCTCCTGGAATATATGATATT
TATAGTCAGCAACAGATGATAGAGCAGCTGAGTCAGCTGATAACTGATCACCTGCAAATACAGCGTTGGC
TCTTTAAAATGGACTCTGAGTTCCGAGGAAATGGGACTGCATTTTGTGATATTCCTTCCTACCTAAAGTG
CTACAAATGGGTGCTAAAGGAGAGTAGCAGATATGGCCTTGAAGACTGGAGAAAGAAATGGGCACAAGAG
CCAGCTTTGGTGAAGATCTCTGAGGAGCTGGCGGGCATTTTAGCACAGCACGCACAGCCAGTCAATGAGA
AACGGTTCCCGACGTGGAGGAAATTCCTCCAAACATTTCTCAGTCAAGGGGGTGTGATCGAAGCATTCCC
ACCTGCAGACAATGTCACCAACCTCACAGTGGACATGCTGATAGAGCCCAACGGGAAAATCAGCGTGCTG
TCGACAGGGGACCAGCTTCATGCTGAAAGCCCCTTCATCTCCTCTGGTACCACCGTGCCTCAGACCTCAG
TGGATCCCCAAGTTCTCACTTATTTGTGCCTCCAAATTGGAAAAGCCTGCAGAATGAGAGATGTGGTTGG
TTACTTTTCGATAGATCTGGTGACTTTTATAGATCCAAGCACCTTGGAACAACAGGTGTGGGCAACCGGC
CTTAACCTCGCATATAGTGACCAGCTGGCCCTGACTCAACTCACCTTATACCTGACAAACGGCCATCTGG
ATTGCAGTTTGAGCACCCTGGAAGTGCCCCGCTTTGTTCCAAAGGAAAGGAAGAAAACCAAATGCATGAG
TGCGCTGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGATGACCACCCAGCTAAGACACAGCAAT
CTCTCACTGGTTTTCCACTATGTTTTTCTCCAGATCTGTAGGGCCCATGGCATTGGCTATGATGTTGAGG
AAAGGCAAGGAACTGTTTTTATATTATATGAGCACCTGAAGAGACACAAGTTGGGAATGTTAACAATCGG
CGAGGATCTCCAGGGGGTCCTCATGACCTTTGCTCGCCATCTCTTCATCATCCATCAAGAAATATCAGCA
CCTAATATGCAAGGCGAGACCAATTTTAAGACCACCATTGCTGATATTGAAACTATTCTAAGAGTAACAA
AGGAAAACAAAATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGATAAAAACCTCTCTAAACCCAAGAA
ATGA

Translation (1027 aa):
MAQNTENHDPVGSILIQIHEDLYQLKEKLTKFSPEEKGETLDIQSLETAIKRTEVGLRIHIEKYLNVVNQ
NVLTTSVNDESLYTPQASKWLLPTVIDQKSFIFPQESEGTFWQPQRQHSSSLPVFPRAKIKVSKLIKGSN
ISSLTVLPSSHCTDPYFTPIPVLQADAHKGILSMIERGLIPPTARITFQNPPITPRAAPLHSFDEARKIP
TVATFTIPREPPPSPAEVKFFPKKQRSKGKSRRSRGHHDRKAMKVKTPLRALKSLWDYDFLIYDGVIDNT
APDFLAFKEHFSLAWGGIFSLLEHVEKFLRNYAIPEVKIKGNNLVALLPEFELTNKLTRYDLLSVLEDPA
HVQMLINLPGQRYKGQDGNSEAAMKIQATWKCYKARKFFLFYRQQKWASGVIAIAWLLYCHKTRLKKILK
ESRQRHLENFRIRAKHLAANWNRIRTSRRTIIHIPSLGYSQPVREHIADFNTQQNMQLGRLCDILDANVN
VIYICSHHMNDELVLYYKKILSLHAAVKSGNLEDRSDLQDRFKIITPEAVNIFPKHHMCLATHLMYSPKA
IKRIKNLIRGTEAYIVSGLLHRDDLAVADMLDIPILGSEPELAHLYSTKSGGKRVFDSANVAVPPGIYDI
YSQQQMIEQLSQLITDHLQIQRWLFKMDSEFRGNGTAFCDIPSYLKCYKWVLKESSRYGLEDWRKKWAQE
PALVKISEELAGILAQHAQPVNEKRFPTWRKFLQTFLSQGGVIEAFPPADNVTNLTVDMLIEPNGKISVL
STGDQLHAESPFISSGTTVPQTSVDPQVLTYLCLQIGKACRMRDVVGYFSIDLVTFIDPSTLEQQVWATG
LNLAYSDQLALTQLTLYLTNGHLDCSLSTLEVPRFVPKERKKTKCMSALSMPMLATSRYAVMTTQLRHSN
LSLVFHYVFLQICRAHGIGYDVEERQGTVFILYEHLKRHKLGMLTIGEDLQGVLMTFARHLFIIHQEISA
PNMQGETNFKTTIADIETILRVTKENKMRFEEEQQSKDDKNLSKPKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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