CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS32282.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
32282.1 |
Public |
Homo sapiens |
15 |
LRRC49 |
24 |
110 |
108 |
|
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 32282.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000260382.10 |
ENSP00000260382.4 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_017691.5 |
NP_060161.2 |
MANE Select |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_060161.2 |
686 |
Q8IUZ0-1 |
686 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 32282.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2061 nt): ATGATTCCCGGGAAATATCGCTCTGTTTCTGGCCGGGCTGCGAACAACGTGAACTGCGGGCTTCATCTGG TTATTCAAACATCATCGCTTCCTGAAAAAAACAAAGTTGAATTCAAGCTAAATAAAGACACATCGTCATT CCCCGGTAGACTTTTACAACATGACCTTGAAAGAAACTACTCAAGTAGGCAAGGTGATCATATTAATTTG GTGAGCTCATCATTGTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGAGAAAATTCTTTACTCAGACA GGTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTT GAACTTTCAACACAATTTTATAACTCGGATACAAAATATTTCTAATCTACAGAAGTTAATATCGTTGGAT TTATATGATAACCAGATTGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGG GGAAAAACAGAATCAAGAAAATCTCAAATCTGGAGAATCTAAAAAGCTTAGATGTCTTGGATCTTCATGG AAATCAGATTACCAAAATTGAAAATATTAATCATTTGTGTGAGTTGAGAGTTTTAAATCTTGCCAGGAAC TTTTTAAGTCATGTTGATAATCTTAATGGGCTGGATTCACTAACTGAACTTAACTTGCGACACAATCAAA TCACTTTCGTGAGAGATGTGGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAGCTTTAACAATATATC TAGTTTTGACAGTGTTTCCTGCCTTGCTGACTCTTCTTCCCTCTCGGACATCACCTTTGATGGCAATCCC ATAGCTCAAGAGTCATGGTACAAACACACTGTCCTTCAGAATATGATGCAGCTGCGCCAGCTAGATATGA AGAGAATCACGGAAGAAGAAAGGCGTATGGCATCTGTTTTAGCCAAAAAAGAGGAAGAGAAGAAGCGGGA AAGTCATAAACAATCTTTGCTTAAGGAGAAGAAAAGGTTAACAATTAACAACGTAGCTCGACAGTGGGAC TTGCAACAACAACGAGTAGCCAATATTGCTACAAATGAAGATAGAAAAGATTCTGACTCTCCTCAGGACC CCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACAGGGCCTCTAGACTCAGGACTCAA CAATGCTTTACAAGGTTTATCTGTCATAGACACATACCTTGTTGAAGTGGACGGGGATACACTTTCCCTA TATGGCTCAGGAGCACTGGAATCTCTGGATAGGAATTGGAGTGTTCAAACAGCAGGAATGATCACAACAG TCTCCTTCACTTTCATAGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTGAAGATTAAGTTTCCTAA TTCTCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTC CGTCGTATTGACCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGTCAATTTTACACTCTGGAAATACT ATGTACTGTTTAGGCTAAGCCATTTCAGTATGCAGAAAATAAATGGAACAGAGGTGACACAGAATGATAT GATAATGGCTGAAAGGCTCTTTGGAATCCTAGCACATGTAGCATCTTCTGAGTTACCCCAGTATCGTCTG ATTTCCATTCTGGGTGATGCCAGGAAAAAGCAATTTCGGTATCTACTAGAATCCAAAGGAAAAAAACCTG GTATTATCAACGAAGAAAATAATGACAGCAAAAGACTTGTAGGAGAAAACACAAATCGTGCTACATTAAA TTATACTACAAGAGACTTTTATAATGAAAAGCTAGAGGAAATAAAGGAAAAGAAGAAATTCTGTAAAACA TATATAGAAGACCTTGTGAAGGAAGCCACAGAAATCAACATGAAAAATGAGGCTTTGCAGAAGCTTTGGC CACAGATGTTCATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGCAATAAAAATTCCTATATGAAGCT CTGCCTACAGCAGATAACAGACCAAAAATAA
Translation (686 aa): MIPGKYRSVSGRAANNVNCGLHLVIQTSSLPEKNKVEFKLNKDTSSFPGRLLQHDLERNYSSRQGDHINL VSSSLSSFPILQRSSEEKILYSDRLSLERQKLTVCPIINGEDHLRLLNFQHNFITRIQNISNLQKLISLD LYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARN FLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNP IAQESWYKHTVLQNMMQLRQLDMKRITEEERRMASVLAKKEEEKKRESHKQSLLKEKKRLTINNVARQWD LQQQRVANIATNEDRKDSDSPQDPCQIDGSTLSAFPEETGPLDSGLNNALQGLSVIDTYLVEVDGDTLSL YGSGALESLDRNWSVQTAGMITTVSFTFIEFDEIVQVLPKLKIKFPNSLHLKFKETNLVMLQQFNALAQL RRIDQLTIDPQGNPVVNFTLWKYYVLFRLSHFSMQKINGTEVTQNDMIMAERLFGILAHVASSELPQYRL ISILGDARKKQFRYLLESKGKKPGIINEENNDSKRLVGENTNRATLNYTTRDFYNEKLEEIKEKKKFCKT YIEDLVKEATEINMKNEALQKLWPQMFIELVRDAVIEIRNKNSYMKLCLQQITDQK
|