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Report for CCDS32467.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32467.1 Public Homo sapiens 16 LRRC36 24 110 108 CCDS HistoryNCBI Gene:55282Re-query CCDS DB by CCDS ID:32467.1Re-query CCDS DB by GeneID:55282See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32467.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329956.11 ENSP00000329943.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329956.11Link to Ensembl Protein Viewer:ENSP00000329943.6Re-query CCDS DB by Nucleotide ID:ENST00000329956Re-query CCDS DB by Protein ID:ENSP00000329943
Original member Current member NCBI NM_018296.6 NP_060766.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018296.6Link to Protein Sequence:NP_060766.5Re-query CCDS DB by Nucleotide ID:NM_018296Re-query CCDS DB by Protein ID:NP_060766Link to BLAST:NP_060766.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060766.5 754 Q1X8D7-1 754 100% 0 0

Chromosomal Locations for CCDS 32467.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67326863 67326932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67341957 67342084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67346256 67346448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67347495 67347591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67350202 67350290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67363590 67363714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67365304 67365355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67367017 67367457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67370944 67371242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67375247 67375412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67376727 67376872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67378589 67378712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67382133 67382247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67384870 67385089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2265 nt):
ATGGCGGAGCAATGGGAGCTGGACGAGGAAGGCATTCGCCGCCTGGGGGCGCTGACGCTGGAGCAGCCGG
AACTGGTGGAGTCTCTTTCATTGCAGGGATCTTATGCTGGCAAAATCCATTCCATTGGTGATGCCTTCAG
AAATTTTAAAAATCTCCGATCCTTAGATTTATCAAGGAATTTGATCACTAGCCTTAAGGGAATCCAGTAT
TTATGTTCACTCCAAGACCTGAATTTATATTATAACAACATTCCTTCATTAGTGGAAGTGTCCCGTCTAC
AACCGTTACCCTTCCTCAAAGAACTGGATTTGAGACTTAATCCTGTTGTAAGGAAAGATACAGATTATAG
GCTCTTTGCTGTATATACACTACAAACTCTGGAGAAATTAGATGACCGAACTGTACGTGAAGGTGAGAGA
AAAGCTGCCAAGCTGCATTTTAGTCAGTTGGGCAACAGTGAAAATTTTCTTTTAGAGGTGGAAAAAAGCT
CTAGGGAGAAGACAATGAAAAACTGTGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGA
CAGCAGGATTGAAATGGACTCAAACAAAGGACTTTTTATTCCCTTCCCCAACCGGGAAATAAAGGATTCC
CTAAGTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCCCACTGGGGACAC
AGACACAGGAAGTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAGGAAGATGAGTTCAGACACTACTC
GCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGAGAAGGGTACCAAGTATCTTTTTTGGAC
AATAAGTCTTCAGGTTCTTCTCCAGAAAAGGAATTGATACCAAAACCTGATACTTTTCATCTTACCCATG
ATGCCTCATTGAGTAAATGCCTGGATGTGGGTGATTCTAGCCAGATCCATCCCTATCAGTTACCTTCAGA
TGTTGGTCTGGAAAATTATGACAGTTGTTATTCTCAAACTCTATCCCTGCATGGAAGTCTTGGTAAAAGG
CCTCAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAGCCTTCAAATGACATAAAGACCACCGCTTCAC
ATTCCTGTGGAGACTTATTAACTTCTCTGTCAAACCCTGACTCCAGCACTGGAAGGCTTTTGAAGCTTAG
TTCAGATCTGTATGCCACAACCCATTTCAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACAATTA
TCTACCAGCCTGGATGATTTAACACCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAACAGGA
CAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATTTTTACCAAGAGGTC
ACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGT
TTCCAAGATGCTACAGGCAGCGAGCCTCTCTCTAGTGACCTGGGTAGTTTGCACGGTTTGGCTGGAAACC
ACAGTCCCCCCATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGA
TAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGTCCTGCCCGAGATTTGCTT
CTGTCTTTGGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACGATGAAAGCAT
TCTGCAGGAGGGAGCTTGAACTGAAGGAGGCTGCGCAGCTGGTCCCTAATGACATGGAAAGTTTGAAGCA
AAAACTGGTCAGAGTGCTGGAGGAAAACCTCATTTTGTCAGAAAAAATTCAACAGTTGGAGGAAGGTGCT
GCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGA
CCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGAGAAGACAGTTGCCATTCT
CCATGAAAGTCAGAGATCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAA
GGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTCATCATCTGGGGAGATCATCGCCCTTTGGGA
AAAGCACGTTGTCTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGA
TGCTGCCCCAGAGCCTGGCTTATAG

Translation (754 aa):
MAEQWELDEEGIRRLGALTLEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQY
LCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVYTLQTLEKLDDRTVREGER
KAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASKVSANVDSRIEMDSNKGLFIPFPNREIKDS
LSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLD
NKSSGSSPEKELIPKPDTFHLTHDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKR
PQRSKNYQEYSIKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQL
STSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG
FQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNKKFLGPARDLL
LSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGA
AISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPK
GYSGKALLPPEKGHHLGRSSPFGKSTLSSSSPVAHETGQYLIQSVLDAAPEPGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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