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Report for CCDS3252.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3252.1 Public Homo sapiens 3 EIF2B5 24 110 108 CCDS HistoryNCBI Gene:8893Re-query CCDS DB by CCDS ID:3252.1Re-query CCDS DB by GeneID:8893See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3252.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000648915.2 ENSP00000497160.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000648915.2Link to Ensembl Protein Viewer:ENSP00000497160.1Re-query CCDS DB by Nucleotide ID:ENST00000648915Re-query CCDS DB by Protein ID:ENSP00000497160
Original member Current member NCBI NM_003907.3 NP_003898.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003907.3Link to Protein Sequence:NP_003898.2Re-query CCDS DB by Nucleotide ID:NM_003907Re-query CCDS DB by Protein ID:NP_003898Link to BLAST:NP_003898.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003898.2 721 Q13144 721 100% 0 0

Chromosomal Locations for CCDS 3252.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 184135386 184135580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184136612 184136736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184137620 184137805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184137898 184138075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184138166 184138246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184140080 184140157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184140418 184140730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184141925 184142070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184142237 184142378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184142502 184142603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184142779 184142886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184143052 184143142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184143442 184143565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184144099 184144224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184144597 184144707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184144884 184144943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2166 nt):
ATGGCGGCCCCTGTAGTGGCGCCGCCTGGTGTGGTGGTTAGTCGGGCTAACAAGCGCAGCGGCGCGGGGC
CGGGAGGCAGCGGTGGCGGGGGAGCCAGAGGGGCGGAGGAGGAACCGCCGCCGCCCCTACAAGCAGTTCT
GGTGGCCGATAGCTTCGATCGCCGCTTCTTCCCCATCTCCAAGGACCAGCCTCGGGTCCTCTTGCCCCTG
GCCAATGTGGCATTAATTGACTACACTCTGGAATTCCTGACTGCCACAGGTGTACAGGAAACATTTGTCT
TTTGTTGCTGGAAAGCTGCTCAAATCAAAGAACATTTACTGAAGTCAAAGTGGTGCCGCCCTACATCTCT
CAATGTGGTTCGAATAATTACATCAGAGCTCTATCGATCACTGGGAGATGTCCTCCGTGATGTTGATGCC
AAGGCTTTGGTGCGCTCTGACTTTCTTCTGGTGTATGGGGATGTCATCTCAAACATCAATATCACCAGAG
CCCTTGAGGAACACAGGTTGAGACGGAAGCTAGAAAAAAATGTTTCTGTGATGACGATGATCTTCAAGGA
GTCATCCCCCAGCCACCCAACTCGTTGCCACGAAGACAATGTGGTAGTGGCTGTGGATAGTACCACAAAC
AGGGTTCTCCATTTTCAGAAGACCCAGGGTCTCCGGCGTTTTGCATTTCCTCTGAGCCTGTTTCAGGGCA
GTAGTGATGGAGTGGAGGTTCGATATGATTTACTGGATTGTCATATCAGCATCTGTTCTCCTCAGGTGGC
ACAACTCTTTACAGACAACTTTGACTACCAAACTCGAGATGACTTTGTGCGAGGTCTCTTAGTGAATGAG
GAGATCCTAGGGAACCAGATCCACATGCACGTAACAGCTAAGGAATATGGTGCCCGTGTCTCCAACCTAC
ACATGTACTCAGCTGTCTGTGCTGACGTCATCCGCCGATGGGTCTACCCTCTCACCCCAGAGGCGAACTT
CACTGACAGCACCACCCAGAGCTGCACTCATTCCCGGCACAACATCTACCGAGGGCCTGAGGTCAGCCTG
GGCCATGGCAGCATCCTAGAGGAAAATGTGCTCCTGGGCTCTGGCACTGTCATTGGCAGCAATTGCTTTA
TCACCAACAGTGTCATTGGCCCCGGCTGCCACATTGGTGATAACGTGGTGCTGGACCAGACCTACCTGTG
GCAGGGTGTTCGAGTGGCGGCTGGAGCACAGATCCATCAGTCTCTGCTTTGTGACAATGCTGAGGTCAAG
GAACGAGTGACACTGAAACCACGCTCTGTCCTCACTTCCCAGGTGGTCGTGGGCCCAAATATCACGCTGC
CTGAGGGCTCGGTGATCTCTTTGCACCCTCCAGATGCAGAGGAAGATGAAGATGATGGCGAGTTCAGTGA
TGATTCTGGGGCTGACCAAGAAAAGGACAAAGTGAAGATGAAAGGTTACAATCCAGCAGAAGTAGGAGCT
GCTGGCAAGGGCTACCTCTGGAAAGCTGCAGGCATGAACATGGAGGAAGAGGAGGAACTGCAGCAGAATC
TGTGGGGACTCAAGATCAACATGGAAGAAGAGAGTGAAAGTGAAAGTGAGCAAAGTATGGATTCTGAGGA
GCCGGACAGCCGGGGAGGCTCCCCTCAGATGGATGACATCAAAGTGTTCCAGAATGAAGTTTTAGGAACA
CTACAGCGGGGCAAAGAGGAGAACATTTCTTGTGACAATCTCGTCCTGGAAATCAACTCTCTCAAGTATG
CCTATAACATAAGTCTAAAGGAGGTGATGCAGGTACTGAGCCACGTGGTCCTGGAGTTCCCCCTGCAACA
GATGGATTCCCCGCTTGACTCAAGCCGCTACTGTGCCCTGCTGCTTCCTCTGCTAAAGGCCTGGAGCCCT
GTTTTTAGGAACTACATAAAGCGCGCAGCCGACCATTTGGAAGCGTTAGCAGCCATTGAGGACTTCTTCC
TAGAGCATGAAGCTCTTGGTATTTCCATGGCCAAGGTACTGATGGCTTTCTACCAGCTGGAGATCCTGGC
TGAGGAAACAATTCTGAGCTGGTTCAGCCAAAGAGATACAACTGACAAGGGCCAGCAGTTGCGCAAGAAT
CAACAGCTGCAGAGGTTCATCCAGTGGCTAAAAGAGGCAGAAGAGGAGTCATCTGAAGATGACTGA

Translation (721 aa):
MAAPVVAPPGVVVSRANKRSGAGPGGSGGGGARGAEEEPPPPLQAVLVADSFDRRFFPISKDQPRVLLPL
ANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLLKSKWCRPTSLNVVRIITSELYRSLGDVLRDVDA
KALVRSDFLLVYGDVISNINITRALEEHRLRRKLEKNVSVMTMIFKESSPSHPTRCHEDNVVVAVDSTTN
RVLHFQKTQGLRRFAFPLSLFQGSSDGVEVRYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLVNE
EILGNQIHMHVTAKEYGARVSNLHMYSAVCADVIRRWVYPLTPEANFTDSTTQSCTHSRHNIYRGPEVSL
GHGSILEENVLLGSGTVIGSNCFITNSVIGPGCHIGDNVVLDQTYLWQGVRVAAGAQIHQSLLCDNAEVK
ERVTLKPRSVLTSQVVVGPNITLPEGSVISLHPPDAEEDEDDGEFSDDSGADQEKDKVKMKGYNPAEVGA
AGKGYLWKAAGMNMEEEEELQQNLWGLKINMEEESESESEQSMDSEEPDSRGGSPQMDDIKVFQNEVLGT
LQRGKEENISCDNLVLEINSLKYAYNISLKEVMQVLSHVVLEFPLQQMDSPLDSSRYCALLLPLLKAWSP
VFRNYIKRAADHLEALAAIEDFFLEHEALGISMAKVLMAFYQLEILAEETILSWFSQRDTTDKGQQLRKN
QQLQRFIQWLKEAEEESSEDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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