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Report for CCDS32684.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32684.1 Public Homo sapiens 17 CA10 24 110 108 CCDS HistoryNCBI Gene:56934Re-query CCDS DB by CCDS ID:32684.1Re-query CCDS DB by GeneID:56934See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32684.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285273.8 ENSP00000285273.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000285273.8Link to Ensembl Protein Viewer:ENSP00000285273.4Re-query CCDS DB by Nucleotide ID:ENST00000285273Re-query CCDS DB by Protein ID:ENSP00000285273
Original member Current member EBI ENST00000442502.6 ENSP00000390666.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000442502.6Link to Ensembl Protein Viewer:ENSP00000390666.2Re-query CCDS DB by Nucleotide ID:ENST00000442502Re-query CCDS DB by Protein ID:ENSP00000390666
Original member Current member EBI ENST00000451037.7 ENSP00000405388.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451037.7Link to Ensembl Protein Viewer:ENSP00000405388.2Re-query CCDS DB by Nucleotide ID:ENST00000451037Re-query CCDS DB by Protein ID:ENSP00000405388
Original member Current member NCBI NM_001082533.1 NP_001076002.1 Accepted alive Link to Nucleotide Sequence:NM_001082533.1Link to Protein Sequence:NP_001076002.1Re-query CCDS DB by Nucleotide ID:NM_001082533Re-query CCDS DB by Protein ID:NP_001076002Link to BLAST:NP_001076002.1
Original member Current member NCBI NM_001082534.2 NP_001076003.1 Accepted alive Link to Nucleotide Sequence:NM_001082534.2Link to Protein Sequence:NP_001076003.1Re-query CCDS DB by Nucleotide ID:NM_001082534Re-query CCDS DB by Protein ID:NP_001076003Link to BLAST:NP_001076003.1
Original member Current member NCBI NM_020178.5 NP_064563.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020178.5Link to Protein Sequence:NP_064563.1Re-query CCDS DB by Nucleotide ID:NM_020178Re-query CCDS DB by Protein ID:NP_064563Link to BLAST:NP_064563.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001076002.1 328 Q9NS85-1 328 100% 0 0
NP_001076003.1 328 Q9NS85-1 328 100% 0 0
NP_064563.1 328 Q9NS85-1 328 100% 0 0

Chromosomal Locations for CCDS 32684.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 51631584 51631606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51633476 51633650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51635855 51636009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51649182 51649254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51653641 51653736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51747633 51747818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51930990 51931132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 52072319 52072393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 52157726 52157786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGAAATAGTCTGGGAGGTGCTTTTTCTTCTTCAAGCCAATTTCATCGTCTGCATATCAGCTCAACAGA
ATTCACCAAAAATCCATGAAGGCTGGTGGGCATACAAGGAGGTGGTCCAGGGAAGCTTTGTTCCAGTTCC
TTCTTTCTGGGGATTGGTGAACTCAGCTTGGAATCTTTGCTCTGTGGGGAAACGGCAGTCGCCAGTCAAC
ATAGAGACCAGTCACATGATCTTCGACCCCTTTCTGACACCTCTTCGCATCAACACGGGGGGCAGGAAGG
TCAGTGGGACCATGTACAACACTGGAAGACACGTATCCCTTCGCCTGGACAAGGAGCACTTGGTCAACAT
ATCTGGAGGGCCCATGACATACAGCCACCGGCTGGAGGAGATCCGACTACACTTTGGGAGTGAGGACAGC
CAAGGGTCGGAGCACCTCCTCAATGGACAGGCCTTCTCTGGGGAGGTGCAGCTCATCCACTATAACCATG
AGCTATATACGAATGTCACAGAAGCTGCAAAGAGTCCAAATGGATTGGTGGTAGTTTCTATATTTATAAA
AGTTTCTGATTCATCAAACCCATTTCTTAATCGAATGCTCAACAGAGATACTATCACAAGAATAACATAT
AAAAATGATGCATATTTACTACAGGGGCTTAATATAGAGGAACTATATCCAGAGACCTCTAGTTTCATCA
CTTACGATGGGTCGATGACTATCCCACCCTGCTATGAGACAGCAAGTTGGATCATAATGAACAAACCTGT
CTATATAACCAGGATGCAGATGCATTCCTTGCGCCTGCTCAGCCAGAACCAGCCATCTCAGATCTTTCTG
AGCATGAGTGACAACTTCAGGCCTGTCCAGCCACTCAACAACCGCTGCATCCGCACCAATATCAACTTCA
GTTTACAGGGGAAGGACTGTCCAAACAACCGAGCCCAGAAGCTTCAGTATAGAGTAAATGAATGGCTCCT
CAAGTAG

Translation (328 aa):
MEIVWEVLFLLQANFIVCISAQQNSPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWNLCSVGKRQSPVN
IETSHMIFDPFLTPLRINTGGRKVSGTMYNTGRHVSLRLDKEHLVNISGGPMTYSHRLEEIRLHFGSEDS
QGSEHLLNGQAFSGEVQLIHYNHELYTNVTEAAKSPNGLVVVSIFIKVSDSSNPFLNRMLNRDTITRITY
KNDAYLLQGLNIEELYPETSSFITYDGSMTIPPCYETASWIIMNKPVYITRMQMHSLRLLSQNQPSQIFL
SMSDNFRPVQPLNNRCIRTNINFSLQGKDCPNNRAQKLQYRVNEWLLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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