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Report for CCDS32785.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32785.1 Public Homo sapiens 18 ARHGAP28 24 110 108 CCDS HistoryNCBI Gene:79822Re-query CCDS DB by CCDS ID:32785.1Re-query CCDS DB by GeneID:79822See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32785.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314319.7 ENSP00000313506.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000314319.7Link to Ensembl Protein Viewer:ENSP00000313506.3Re-query CCDS DB by Nucleotide ID:ENST00000314319Re-query CCDS DB by Protein ID:ENSP00000313506
Original member Current member EBI ENST00000419673.6 ENSP00000392660.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000419673.6Link to Ensembl Protein Viewer:ENSP00000392660.2Re-query CCDS DB by Nucleotide ID:ENST00000419673Re-query CCDS DB by Protein ID:ENSP00000392660
Original member Current member NCBI NM_001010000.3 NP_001010000.1 Accepted alive Link to Nucleotide Sequence:NM_001010000.3Link to Protein Sequence:NP_001010000.1Re-query CCDS DB by Nucleotide ID:NM_001010000Re-query CCDS DB by Protein ID:NP_001010000Link to BLAST:NP_001010000.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010000.1 570 Q9P2N2-5 570 100% 0 0

Chromosomal Locations for CCDS 32785.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 6837349 6837414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6851034 6851126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6859808 6859897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6868150 6868234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6870590 6870732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6873409 6873574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6873684 6873775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6876131 6876208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6882137 6882299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6887157 6887239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6889888 6890085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6890430 6890543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6894835 6894891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6896502 6896626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6908960 6909024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6912060 6912154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGAGGAAAAAGGATAAGCAATCTATCAGGGATGTCAGAGACATTTTTGGAGTCAGTGAATCTCCTCCTC
GTGATACCTGTGGCAACCACACTAATCAGCTGGATGGCACCAAGGAAGAAAGAGAGCTTCCAAGAGTTAT
CAAGACAAGTGGTTCCATGCCAGATGATGCTTCTCTCAACAGTACTACCCTGTCTGACGCATCCCAGGAT
AAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACCATTCCAGTTCTACCAG
TTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGATGATGATTTTCTGGA
AAAGAACATTCCACCAGAGGCTGAAGAGCTGTCATTTGAAGTGTCTTATTCAGAAATGGTTACGGAGGCT
CTAAAAAGAAATAAACTTAAGAAATCAGAGATTAAGAAAGAAGACTATGTTTTAACTAAATTTAATGTTC
AGAAAACCAGATTTGGCTTAACTGAAGCAGGAGATCTGTCTGCTGAAGACATGAAGAAAATCCGCCATCT
CTCTCTGATTGAATTGACTGCCTTTTTTGATGCCTTTGGAATTCAACTGAAAAGGAACAAAACAGAGAAA
GTAAAAGGACGAGACAATGGGATTTTTGGAGTTCCACTTACAGTCCTCCTGGACGGTGACCGAAAGAAAG
ACCCTGGAGTGAAAGTTCCCCTGGTATTACAAAAATTTTTTGAGAAAGTTGAGGAATCAGGTCTGGAATC
TGAAGGAATTTTTCGACTTTCAGGATGTACTGCTAAAGTCAAGCAATACCGTGAAGAACTTGATGCCAAG
TTTAATGCTGATAAATTTAAATGGGACAAAATGTGCCATAGAGAAGCTGCAGTAATGTTGAAAGCGTTTT
TCAGAGAACTACCCACCTCTCTCTTCCCTGTGGAATATATACCTGCCTTCATCAGTCTAATGGAAAGAGG
GCCTCACGTCAAAGTACAGTTTCAAGCCTTACACCTCATGGTCATGGCGCTGCCTGATGCCAACAGAGAT
GCAGCTCAGGCCCTCATGACATTCTTCAATAAAGTGATTGCCAATGAATCAAAAAACCGAATGAGTCTGT
GGAACATTTCTACAGTGATGGCACCAAACCTTTTCTTCAGTAGAAGCAAACACTCTGATTATGAAGAATT
ACTGTTAGCAAACACTGCGGCCCACATCATCCGCCTAATGCTTAAGTACCAGAAGATTTTGTGGAAGGTT
CCATCTTTCTTAATCACTCAAGTAAGAAGAATGAATGAAGCCACGATGCTATTGAAGAAGCAGCTCCCAA
GTGTCAGGAAGCTGCTCAGGAGGAAGACCCTCGAGCGGGAGACTGCAAGCCCCAAGACTTCAAAGGTACT
GCAAAAATCACCCTCGGCAAGACGAATGTCTGACGTGCCGGAAGGAGTCATACGGGTCCATGCTCCACTT
CTCTCCAAGGTGTCCATGGCCATTCAACTCAACAATCAAACCAAAGCCAAAGACATATTGGCAAAATTTC
AATATGAAAACAGTCATGGTTCATCAGAATGTATTAAGATTCAGAACCAAAGGTTATATGAAATTGGAGG
AAATATAGGAGAGCATTGCTTGGATCCAGATGCTTATATATTGGATGTATATCGTATAAATCCTCAAGCA
GAATGGGTGATTAAACCCCAACAAAGTTCTTAA

Translation (570 aa):
MRKKDKQSIRDVRDIFGVSESPPRDTCGNHTNQLDGTKEERELPRVIKTSGSMPDDASLNSTTLSDASQD
KEGSFAVPRSDSVAILETIPVLPVHSNGSPEPGQPVQNAISDDDFLEKNIPPEAEELSFEVSYSEMVTEA
LKRNKLKKSEIKKEDYVLTKFNVQKTRFGLTEAGDLSAEDMKKIRHLSLIELTAFFDAFGIQLKRNKTEK
VKGRDNGIFGVPLTVLLDGDRKKDPGVKVPLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAK
FNADKFKWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFISLMERGPHVKVQFQALHLMVMALPDANRD
AAQALMTFFNKVIANESKNRMSLWNISTVMAPNLFFSRSKHSDYEELLLANTAAHIIRLMLKYQKILWKV
PSFLITQVRRMNEATMLLKKQLPSVRKLLRRKTLERETASPKTSKVLQKSPSARRMSDVPEGVIRVHAPL
LSKVSMAIQLNNQTKAKDILAKFQYENSHGSSECIKIQNQRLYEIGGNIGEHCLDPDAYILDVYRINPQA
EWVIKPQQSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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