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Report for CCDS32857.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32857.1 Public Homo sapiens 19 PALM 24 110 108 CCDS HistoryNCBI Gene:5064Re-query CCDS DB by CCDS ID:32857.1Re-query CCDS DB by GeneID:5064See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32857.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338448.10 ENSP00000341911.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338448.10Link to Ensembl Protein Viewer:ENSP00000341911.4Re-query CCDS DB by Nucleotide ID:ENST00000338448Re-query CCDS DB by Protein ID:ENSP00000341911
Original member Current member NCBI NM_002579.3 NP_002570.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002579.3Link to Protein Sequence:NP_002570.2Re-query CCDS DB by Nucleotide ID:NM_002579Re-query CCDS DB by Protein ID:NP_002570Link to BLAST:NP_002570.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002570.2 387 O75781-1 387 100% 0 0

Chromosomal Locations for CCDS 32857.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 709147 709151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 726138 726189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 727008 727088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 727564 727694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 731095 731245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 734173 734194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 736019 736078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 740352 740483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 746285 746814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1164 nt):
ATGGAGGTCCTGGCGGCAGAGACCACGTCCCAGCAGGAGCGGCTGCAGGCCATCGCAGAGAAGCGGAAGC
GGCAGGCGGAGATCGAGAACAAGCGCCGGCAGCTGGAGGACGAGCGGAGGCAGCTGCAGCACCTGAAGTC
CAAGGCACTGCGGGAGCGCTGGCTGCTGGAGGGGACGCCGTCCTCGGCCTCAGAGGGGGATGAGGACCTG
AGGAGGCAGATGCAGGACGACGAGCAGAAGACACGGCTGCTGGAGGACTCGGTGTCCAGGTTGGAGAAGG
AAATTGAGGTGCTGGAGCGTGGAGACTCCGCCCCAGCCACTGCCAAGGAGAACGCGGCGGCCCCGAGCCC
AGTCCGGGCCCCAGCCCCGAGTCCAGCCAAGGAGGAGCGCAAGACAGAGGTGGTGATGAATTCACAGCAG
ACGCCGGTGGGCACGCCCAAAGACAAGCGAGTCTCCAACACGCCCCTGAGGACGGTTGACGGCTCCCCCA
TGATGAAGGCAGCCATGTACTCGGTTGAGATCACTGTGGAGAAGGACAAGGTGACAGGGGAGACCAGGGT
GCTGTCCAGCACCACGCTGCTCCCTCGGCAGCCGCTCCCTCTGGGCATCAAAGTCTACGAGGACGAGACC
AAAGTGGTCCATGCTGTGGACGGCACCGCCGAGAACGGGATCCACCCCCTGAGCTCCTCCGAGGTGGACG
AACTCATCCACAAAGCGGACGAGGTCACGCTGAGCGAGGCAGGGTCCACGGCCGGGGCGGCAGAGACCCG
GGGGGCTGTGGAGGGGGCAGCCCGGACCACGCCCTCCCGGCGGGAGATCACCGGTGTGCAGGCACAGCCA
GGCGAGGCCACGTCCGGCCCGCCGGGGATCCAGCCCGGCCAGGAGCCCCCGGTCACAATGATCTTCATGG
GTTACCAGAACGTGGAGGATGAGGCCGAGACCAAGAAGGTGCTGGGCCTTCAAGATACCATCACGGCGGA
GCTGGTGGTCATCGAAGACGCGGCTGAGCCCAAGGAGCCTGCACCACCCAACGGCAGTGCTGCCGAGCCT
CCCACGGAGGCCGCCTCCAGGGAAGAGAATCAGGCGGGGCCCGAGGCCACCACCAGCGACCCCCAGGACC
TCGACATGAAGAAGCACCGTTGTAAATGCTGCTCCATCATGTGA

Translation (387 aa):
MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDL
RRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQ
TPVGTPKDKRVSNTPLRTVDGSPMMKAAMYSVEITVEKDKVTGETRVLSSTTLLPRQPLPLGIKVYEDET
KVVHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP
GEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAAEPKEPAPPNGSAAEP
PTEAASREENQAGPEATTSDPQDLDMKKHRCKCCSIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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