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Report for CCDS32916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32916.1 Public Homo sapiens 19 ZNF136 24 110 108 CCDS HistoryNCBI Gene:7695Re-query CCDS DB by CCDS ID:32916.1Re-query CCDS DB by GeneID:7695See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343979.6 ENSP00000344162.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343979.6Link to Ensembl Protein Viewer:ENSP00000344162.4Re-query CCDS DB by Nucleotide ID:ENST00000343979Re-query CCDS DB by Protein ID:ENSP00000344162
Original member Current member NCBI NM_003437.5 NP_003428.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003437.5Link to Protein Sequence:NP_003428.1Re-query CCDS DB by Nucleotide ID:NM_003437Re-query CCDS DB by Protein ID:NP_003428Link to BLAST:NP_003428.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003428.1 540 P52737 540 100% 0 0

Chromosomal Locations for CCDS 32916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12163204 12163206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12185785 12185911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12186114 12186174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12186570 12188001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1623 nt):
ATGGACTCGGTGGCTTTTGAGGATGTAGATGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTAGATCCTT
CCCAGAAGAATCTCTACAGAGATGTGATGTGGGAAACCATGAGGAATCTGGCCTCTATAGGGAAAAAATG
GAAGGACCAGAACATTAAAGATCACTACAAACACCGAGGGAGAAATCTAAGAAGTCATATGTTAGAAAGA
CTCTATCAAACTAAGGATGGTAGTCAGCGTGGAGGAATTTTTAGCCAGTTTGCAAATCAGAATCTGAGCA
AGAAAATCCCTGGAGTGAAACTCTGTGAAAGCATTGTATATGGAGAAGTCAGCATGGGTCAGTCATCCCT
TAATAGACACATCAAAGATCACAGTGGACATGAACCAAAGGAATATCAGGAATATGGAGAGAAGCCAGAT
ACACGTAACCAGTGTTGGAAACCCTTCAGTTCTCACCACTCCTTTCGAACACATGAGATAATTCACACTG
GAGAGAAACTCTATGATTGTAAGGAATGTGGAAAAACCTTCTTTTCTCTCAAAAGAATTAGAAGACACAT
CATCACACACAGTGGATATACACCATATAAATGTAAGGTGTGTGGGAAAGCTTTTGATTATCCCAGTAGA
TTTCGAACACATGAAAGAAGTCACACTGGAGAGAAACCCTATGAATGTCAGGAATGTGGAAAAGCCTTCA
CTTGTATCACAAGTGTTCGAAGACACATGATAAAGCACACTGGAGATGGACCTTATAAATGTAAGGTATG
TGGGAAACCCTTTCATTCTCTGAGTTCATTTCAAGTGCATGAAAGAATTCACACTGGAGAAAAACCCTTT
AAATGTAAGCAATGTGGTAAAGCCTTCAGTTGTTCCCCAACCTTACGAATACATGAAAGAACCCATACTG
GAGAGAAACCTTATGAATGCAAGCAGTGTGGGAAGGCCTTCAGTTATCTCCCCTCCCTTCGACTACATGA
AAGAATTCACACTGGTGAGAAACCCTTCGTATGTAAACAATGTGGTAAAGCCTTTAGATCTGCCAGTACC
TTTCAAATACATGAAAGGACTCACACTGGAGAAAAACCTTATGAATGTAAGGAATGTGGGGAAGCATTCA
GTTGTATCCCAAGTATGCGAAGACACATGATAAAACATACTGGAGAAGGACCTTATAAATGTAAGGTATG
TGGGAAACCCTTTCATTCTCTGAGTCCATTTCGAATACATGAAAGAACTCACACTGGAGAGAAACCTTAT
GTATGTAAACATTGTGGTAAAGCTTTCGTTTCTTCAACATCAATTCGAATACATGAAAGAACTCATACTG
GAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGTTATCTCAACTCCTTTCGAACACATGA
AATGATTCACACTGGTGAGAAACCCTTTGAATGTAAGCGATGTGGTAAAGCCTTTAGATCTTCTAGTTCC
TTTCGACTACATGAAAGGACTCACACTGGACAGAAACCCTATCATTGCAAGGAATGTGGGAAAGCCTATT
CTTGCCGTGCCAGCTTTCAGAGACACATGTTAACACATGCTGAAGATGGACCACCTTATAAATGCATGTG
GGAAAGCCTTTAA

Translation (540 aa):
MDSVAFEDVDVNFTQEEWALLDPSQKNLYRDVMWETMRNLASIGKKWKDQNIKDHYKHRGRNLRSHMLER
LYQTKDGSQRGGIFSQFANQNLSKKIPGVKLCESIVYGEVSMGQSSLNRHIKDHSGHEPKEYQEYGEKPD
TRNQCWKPFSSHHSFRTHEIIHTGEKLYDCKECGKTFFSLKRIRRHIITHSGYTPYKCKVCGKAFDYPSR
FRTHERSHTGEKPYECQECGKAFTCITSVRRHMIKHTGDGPYKCKVCGKPFHSLSSFQVHERIHTGEKPF
KCKQCGKAFSCSPTLRIHERTHTGEKPYECKQCGKAFSYLPSLRLHERIHTGEKPFVCKQCGKAFRSAST
FQIHERTHTGEKPYECKECGEAFSCIPSMRRHMIKHTGEGPYKCKVCGKPFHSLSPFRIHERTHTGEKPY
VCKHCGKAFVSSTSIRIHERTHTGEKPYECKQCGKAFSYLNSFRTHEMIHTGEKPFECKRCGKAFRSSSS
FRLHERTHTGQKPYHCKECGKAYSCRASFQRHMLTHAEDGPPYKCMWESL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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