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Report for CCDS32961.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32961.1 Public Homo sapiens 19 FKBP8 24 110 108 CCDS HistoryNCBI Gene:23770Re-query CCDS DB by CCDS ID:32961.1Re-query CCDS DB by GeneID:23770See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32961.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000597960.7 ENSP00000471700.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000597960.7Link to Ensembl Protein Viewer:ENSP00000471700.1Re-query CCDS DB by Nucleotide ID:ENST00000597960Re-query CCDS DB by Protein ID:ENSP00000471700
Original member Current member EBI ENST00000608443.6 ENSP00000476767.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000608443.6Link to Ensembl Protein Viewer:ENSP00000476767.1Re-query CCDS DB by Nucleotide ID:ENST00000608443Re-query CCDS DB by Protein ID:ENSP00000476767
Original member Current member NCBI NM_012181.5 NP_036313.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012181.5Link to Protein Sequence:NP_036313.3Re-query CCDS DB by Nucleotide ID:NM_012181Re-query CCDS DB by Protein ID:NP_036313Link to BLAST:NP_036313.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036313.3 413 Q14318-2 413 100% 0 0

Chromosomal Locations for CCDS 32961.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 18532169 18532255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18532664 18532795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18533270 18533347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18537601 18537773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18538216 18538436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18539371 18539459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18539551 18539720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18541679 18541970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACT
TCGAGGTACTGGATGGGGTTGAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGA
TGACCTGAGTGAGCTGCCACCGCTGGAGGACATGGGACAACCCCCGGCGGAGGAGGCTGAGCAGCCTGGG
GCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGCCCGCCCCAGCCCCGGCCCCAGAAGAGTGGC
TGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTTCGAGCCGCCC
GGTCAAGGGCCAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAG
CCGGAGCTGGTGTTCACTCTGGGTGACTGTGACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGG
ACGTGGGGGAGACGGCCATGGTCACTGCTGACTCCAAGTACTGCTACGGCCCCCAAGGCAGCAGGAGCCC
ATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTGTGGACGGGCCTGACCTG
GAGATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACC
AGCGGGCGGACTTCGTCCTGGCCGCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAA
AGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAGTTGAAGGTGAAGTGTCTGAACAACCTGGCG
GCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTGGAGCACCAGC
CAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCAT
CCCCATCCTGAGGGCAGCCCTGAAGCTGGAACCTTCCAACAAGACGATCCACGCAGAGCTCTCAAAGCTG
GTGAAGAAGCATGCGGCGCAGCGGAGCACGGAGACCGCCTTGTACCGGAAAATGCTGGGCAACCCCAGCC
GGCTGCCTGCTAAGTGCCCTGGCAAGGGTGCCTGGTCCATCCCATGGAAGTGGCTGTTTGGGGCGACTGC
TGTTGCCTTGGGGGGTGTGGCACTCTCTGTGGTCATCGCTGCCAGGAACTGA

Translation (413 aa):
MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQPPAEEAEQPG
ALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE
PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDGPDL
EMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLA
ASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKL
VKKHAAQRSTETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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