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Report for CCDS33003.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
33003.1 |
Public |
Homo sapiens |
19 |
ZNF260 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:339324](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:33003.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:339324](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 33003.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000523638.6 |
ENSP00000429803.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000523638.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000429803.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000523638](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000429803](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000592282.1 |
ENSP00000464964.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000592282.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000464964.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000592282](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000464964](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000593142.5 |
ENSP00000465834.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000593142.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000465834.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000593142](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000465834](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000588993.1 |
ENSP00000467219.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000588993.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000467219.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000588993](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000467219](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001012756.3 |
NP_001012774.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001012756.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001012774.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001012756](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001012774](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001012774.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001166036.2 |
NP_001159508.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001166036.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001159508.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001166036](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001159508](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001159508.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001166037.2 |
NP_001159509.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001166037.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001159509.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001166037](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001159509](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001159509.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001166038.2 |
NP_001159510.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001166038.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001159510.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001166038](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001159510](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001159510.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375596.1 |
NP_001362525.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375596.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362525.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375596](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362525](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362525.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375597.1 |
NP_001362526.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375597.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362526.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375597](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362526](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362526.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375598.1 |
NP_001362527.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375598.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362527.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375598](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362527](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362527.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 33003.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1239 nt): ATGATAGGCATGTTGGAAAGTCTTCAGCATGAATCAGATCTCCTTCAGCATGATCAAATTCATACTGGAG AGAAACCTTATGAATGTAATGAATGTAGAAAAACTTTTAGCCTGAAGCAAAACCTTGTAGAGCATAAGAA AATGCATACTGGAGAGAAATCTCATGAATGCACTGAATGTGGTAAAGTGTGCTCTCGAGTCTCATCTCTT ACTCTACACCTTAGAAGTCACACAGGAAAGAAGGCATATAAATGTAATAAATGTGGAAAAGCCTTCAGCC AGAAGGAAAACTTCCTTTCTCATCAGAAACATCACACTGGAGAGAAACCTTATGAATGTGAAAAAGTTTC TATTCAGATGCCAACCATCATCAGACACCAGAAAAATCATACAGGAACCAAACCCTATGCATGTAAGGAA TGTGGCAAAGCCTTTAACGGCAAAGCATATCTCACTGAGCATGAGAAAATTCATACTGGAGAAAAACCAT TTGAATGTAATCAGTGTGGAAGAGCCTTCAGCCAGAAGCAATACCTCATTAAACATCAGAACATCCATAC TGGAAAGAAGCCCTTTAAATGTAGTGAGTGTGGAAAAGCTTTTAGCCAGAAGGAAAACCTCATTATACAT CAGAGAATCCATACTGGAGAGAAACCTTATGAATGTAAAGGGTGTGGGAAAGCTTTCATTCAGAAGTCAA GCCTCATTAGACACCAGAGAAGTCACACAGGAGAGAAACCTTATACGTGTAAGGAATGTGGGAAAGCCTT CAGTGGCAAGTCAAATCTCACAGAGCATGAGAAAATTCATATTGGAGAGAAACCCTACAAATGTAATGAA TGTGGAACAATCTTCAGGCAGAAGCAATACCTCATTAAACATCACAATATTCATACAGGAGAGAAACCCT ATGAATGTAATAAATGTGGAAAAGCCTTCTCTCGAATCACATCACTTATTGTACATGTGAGAATTCATAC AGGTGATAAGCCTTATGAGTGTAAGGTCTGTGGGAAAGCCTTCTGTCAAAGCTCATCTCTTACTGTGCAT ATGAGAAGCCATACAGGTGAGAAACCCTATGGTTGTAATGAATGTGGGAAAGCCTTTTCTCAGTTCTCAA CCCTTGCTCTGCACATGAGAATCCATACTGGTGAAAAACCTTATCAGTGTAGTGAATGTGGGAAAGCTTT CAGCCAAAAGTCACATCACATTAGACACCAGAGAATTCATACTCATTAA
Translation (412 aa): MIGMLESLQHESDLLQHDQIHTGEKPYECNECRKTFSLKQNLVEHKKMHTGEKSHECTECGKVCSRVSSL TLHLRSHTGKKAYKCNKCGKAFSQKENFLSHQKHHTGEKPYECEKVSIQMPTIIRHQKNHTGTKPYACKE CGKAFNGKAYLTEHEKIHTGEKPFECNQCGRAFSQKQYLIKHQNIHTGKKPFKCSECGKAFSQKENLIIH QRIHTGEKPYECKGCGKAFIQKSSLIRHQRSHTGEKPYTCKECGKAFSGKSNLTEHEKIHIGEKPYKCNE CGTIFRQKQYLIKHHNIHTGEKPYECNKCGKAFSRITSLIVHVRIHTGDKPYECKVCGKAFCQSSSLTVH MRSHTGEKPYGCNECGKAFSQFSTLALHMRIHTGEKPYQCSECGKAFSQKSHHIRHQRIHTH
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