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Report for CCDS33275.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33275.1 Public Homo sapiens 2 TMEM87B 24 110 108 CCDS HistoryNCBI Gene:84910Re-query CCDS DB by CCDS ID:33275.1Re-query CCDS DB by GeneID:84910See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33275.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000283206.9 ENSP00000283206.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000283206.9Link to Ensembl Protein Viewer:ENSP00000283206.4Re-query CCDS DB by Nucleotide ID:ENST00000283206Re-query CCDS DB by Protein ID:ENSP00000283206
Original member Current member NCBI NM_032824.3 NP_116213.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032824.3Link to Protein Sequence:NP_116213.1Re-query CCDS DB by Nucleotide ID:NM_032824Re-query CCDS DB by Protein ID:NP_116213Link to BLAST:NP_116213.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116213.1 555 Q96K49-1 555 100% 0 0

Chromosomal Locations for CCDS 33275.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 112055592 112055756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112059977 112060037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112064162 112064253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112066936 112067067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112074912 112074962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112077192 112077282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112081057 112081118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112081335 112081518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112086005 112086104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112089625 112089718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112091712 112091783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112097044 112097152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112097233 112097291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112098595 112098698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112100622 112100695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112106002 112106075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112107788 112107840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112112899 112112929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112116084 112116143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGGTCGCCGCCTGCCGCTCGGTAGCCGGGCTCCTGCCACGCCGCCGCCGCTGCTTTCCCGCCCGGGCCC
CGCTGCTGCGCGTCGCCCTCTGCCTCCTGTGCTGGACCCCGGCGGCTGTGCGCGCGGTCCCTGAGCTCGG
GCTCTGGTTAGAGACAGTCAACGACAAATCAGGACCTTTGATATTTAGGAAAACTATGTTTAACTCTACA
GATATCAAGTTATCTGTTAAGTCATTCCATTGTTCTGGGCCTGTGAAGTTTACCATAGTGTGGCATTTGA
AGTATCATACCTGTCACAATGAGCATTCTAATCTGGAAGAGCTGTTCCAAAAACATAAACTTAGTGTTGA
TGAAGACTTTTGTCATTATTTGAAGAATGACAACTGTTGGACAACAAAAAATGAAAACTTAGATTGCAAC
AGTGATTCACAGGTGTTTCCCTCTTTGAATAATAAAGAACTAATAAATATCAGAAATGTTTCAAACCAGG
AAAGATCAATGGATGTTGTAGCCAGAACACAAAAAGATGGGTTTCATATCTTTATTGTTTCTATTAAAAC
GGAGAATACAGATGCAAGCTGGAATTTGAATGTTTCTCTTTCTATGATTGGGCCTCATGGATATATCTCT
GCATCAGATTGGCCCCTAATGATTTTTTACATGGTGATGTGTATTGTTTATATATTATATGGCATACTCT
GGCTGACGTGGTCTGCCTGTTATTGGAAAGATATATTAAGAATCCAGTTCTGGATTGCAGCTGTTATTTT
TTTGGGAATGCTTGAAAAAGCAGTTTTTTATAGTGAATACCAAAACATCAGCAACACTGGACTGTCAACC
CAAGGCTTATTGATATTTGCGGAGTTGATTTCTGCGATTAAGAGGACGTTGGCTCGCCTTCTCGTGATCA
TTGTGAGCCTGGGCTATGGCATTGTGAAGCCTCGTTTAGGAACAGTCATGCACCGGGTGATCGGACTGGG
GCTTCTATACTTAATCTTTGCAGCTGTTGAAGGCGTGATGAGAGTCATTGGGGGTTCTAACCATTTAGCT
GTTGTTCTTGATGACATTATTTTAGCAGTTATTGACTCCATTTTTGTGTGGTTCATTTTTATTAGTTTGG
CACAAACTATGAAGACCCTAAGGCTAAGAAAGAACACTGTGAAATTTTCATTATATAGACATTTTAAAAA
TACTCTGATCTTTGCTGTGCTGGCTTCTATAGTGTTTATGGGGTGGACAACTAAGACATTTAGAATTGCA
AAATGCCAATCAGATTGGATGGAACGCTGGGTTGACGATGCATTTTGGAGCTTCCTTTTTTCGCTTATCC
TTATTGTAATCATGTTTTTGTGGAGACCATCAGCAAACAATCAGAGATATGCCTTCATGCCCTTAATAGA
TGATTCTGATGATGAAATTGAGGAATTCATGGTAACTTCTGAAAATTTAACCGAAGGAATAAAATTAAGA
GCCTCAAAATCAGTTTCCAATGGAACAGCTAAGCCTGCCACTTCTGAGAACTTTGATGAAGATTTGAAGT
GGGTAGAAGAAAATATTCCCTCTTCATTCACAGATGTAGCTCTTCCAGTGTTAGTGGATTCAGATGAGGA
AATCATGACCAGATCTGAAATGGCTGAAAAAATGTTCTCTTCAGAAAAGATAATGTGA

Translation (555 aa):
MVAACRSVAGLLPRRRRCFPARAPLLRVALCLLCWTPAAVRAVPELGLWLETVNDKSGPLIFRKTMFNST
DIKLSVKSFHCSGPVKFTIVWHLKYHTCHNEHSNLEELFQKHKLSVDEDFCHYLKNDNCWTTKNENLDCN
SDSQVFPSLNNKELINIRNVSNQERSMDVVARTQKDGFHIFIVSIKTENTDASWNLNVSLSMIGPHGYIS
ASDWPLMIFYMVMCIVYILYGILWLTWSACYWKDILRIQFWIAAVIFLGMLEKAVFYSEYQNISNTGLST
QGLLIFAELISAIKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAVEGVMRVIGGSNHLA
VVLDDIILAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFKNTLIFAVLASIVFMGWTTKTFRIA
KCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLR
ASKSVSNGTAKPATSENFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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