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Report for CCDS33320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33320.1 Public Homo sapiens 2 METTL5 24 110 108 CCDS HistoryNCBI Gene:29081Re-query CCDS DB by CCDS ID:33320.1Re-query CCDS DB by GeneID:29081See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33320.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000260953.10 ENSP00000260953.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000260953.10Link to Ensembl Protein Viewer:ENSP00000260953.5Re-query CCDS DB by Nucleotide ID:ENST00000260953Re-query CCDS DB by Protein ID:ENSP00000260953
Original member Current member EBI ENST00000392640.6 ENSP00000376415.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392640.6Link to Ensembl Protein Viewer:ENSP00000376415.2Re-query CCDS DB by Nucleotide ID:ENST00000392640Re-query CCDS DB by Protein ID:ENSP00000376415
Original member Current member EBI ENST00000409965.5 ENSP00000386582.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409965.5Link to Ensembl Protein Viewer:ENSP00000386582.1Re-query CCDS DB by Nucleotide ID:ENST00000409965Re-query CCDS DB by Protein ID:ENSP00000386582
Original member Current member NCBI NM_001293186.2 NP_001280115.1 Accepted alive Link to Nucleotide Sequence:NM_001293186.2Link to Protein Sequence:NP_001280115.1Re-query CCDS DB by Nucleotide ID:NM_001293186Re-query CCDS DB by Protein ID:NP_001280115Link to BLAST:NP_001280115.1
Original member Current member NCBI NM_001293187.2 NP_001280116.1 Accepted alive Link to Nucleotide Sequence:NM_001293187.2Link to Protein Sequence:NP_001280116.1Re-query CCDS DB by Nucleotide ID:NM_001293187Re-query CCDS DB by Protein ID:NP_001280116Link to BLAST:NP_001280116.1
Original member Current member NCBI NM_014168.4 NP_054887.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014168.4Link to Protein Sequence:NP_054887.2Re-query CCDS DB by Nucleotide ID:NM_014168Re-query CCDS DB by Protein ID:NP_054887Link to BLAST:NP_054887.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001280115.1 209 Q9NRN9 209 100% 0 0
NP_001280116.1 209 Q9NRN9 209 100% 0 0
NP_054887.2 209 Q9NRN9 209 100% 0 0

Chromosomal Locations for CCDS 33320.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 169811820 169811858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169812457 169812506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169815477 169815528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169819561 169819643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169821092 169821273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169821943 169822057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169824489 169824597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (630 nt):
ATGAAGAAAGTAAGGCTTAAGGAACTAGAGAGTCGCCTGCAACAAGTGGATGGATTTGAAAAGCCCAAGC
TACTTCTGGAACAGTATCCTACCAGGCCGCACATTGCAGCATGTATGCTCTATACAATCCATAACACTTA
TGATGACATTGAAAATAAAGTCGTTGCAGATCTAGGATGTGGTTGTGGAGTACTTAGCATCGGAACTGCA
ATGTTAGGAGCAGGGTTGTGTGTTGGATTTGACATAGATGAAGACGCATTGGAAATATTTAATAGGAATG
CAGAAGAGTTTGAGTTAACAAATATTGACATGGTTCAATGTGATGTGTGCTTATTATCTAACAGAATGTC
CAAGTCATTCGATACAGTAATTATGAATCCTCCCTTTGGGACCAAAAATAATAAAGGGACAGATATGGCT
TTTCTAAAGACTGCTTTGGAAATGGCAAGAACAGCAGTATATTCCTTACACAAATCCTCAACTAGAGAAC
ATGTTCAAAAGAAAGCTGCAGAATGGAAAATCAAGATAGATATTATAGCAGAACTTCGATATGACCTGCC
AGCATCATACAAGTTTCACAAAAAGAAATCAGTGGACATTGAAGTGGACCTAATTCGGTTTTCCTTTTAA

Translation (209 aa):
MKKVRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGCGVLSIGTA
MLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDVCLLSNRMSKSFDTVIMNPPFGTKNNKGTDMA
FLKTALEMARTAVYSLHKSSTREHVQKKAAEWKIKIDIIAELRYDLPASYKFHKKKSVDIEVDLIRFSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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