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Report for CCDS33713.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33713.1 Public Homo sapiens 3 PLCL2 24 110 108 CCDS HistoryNCBI Gene:23228Re-query CCDS DB by CCDS ID:33713.1Re-query CCDS DB by GeneID:23228See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33713.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432376.5 ENSP00000412836.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432376.5Link to Ensembl Protein Viewer:ENSP00000412836.1Re-query CCDS DB by Nucleotide ID:ENST00000432376Re-query CCDS DB by Protein ID:ENSP00000412836
Original member Current member NCBI NM_015184.5 NP_055999.2 Accepted alive Link to Nucleotide Sequence:NM_015184.5Link to Protein Sequence:NP_055999.2Re-query CCDS DB by Nucleotide ID:NM_015184Re-query CCDS DB by Protein ID:NP_055999Link to BLAST:NP_055999.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055999.2 1001 Q9UPR0-3 1001 100% 0 0

Chromosomal Locations for CCDS 33713.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 17009725 17012160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17014708 17014911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17042874 17042949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17067956 17068065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17089733 17089912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3006 nt):
ATGCCAACAGAGAAGAAGATCAGCAGTGCAAGTGATTGTATTAATTCAATGGTTGAGGGTTCAGAACTCA
AAAAGGTTCGCTCCAACTCTAGAATTTATCATAGGTACTTTTTACTGGATGCTGACATGCAGAGCCTAAG
GTGGGAGCCATCTAAGAAGGATTCTGAGAAAGCCAAGATTGACATTAAATCCATCAAGGAAGTGAGAACA
GGAAAAAACACAGACATATTCCGCAGCAATGGCATTTCTGACCAGATATCTGAAGATTGTGCGTTTTCCG
TCATATATGGAGAGAATTATGAGTCACTGGATTTGGTTGCCAACTCCGCAGATGTTGCAAACATCTGGGT
TACAGGACTGCGGTACCTAATTTCTTATGGAAAACATACACTTGATATGTTAGAAAGTAGCCAAGATAAC
ATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAAATTGATGTAGATAACCTTGGACATATAACTCTGT
GTAATGCTGTGCAATGTATCAGAAACCTCAATCCTGGTTTAAAAACGAGCAAAATTGAGCTTAAGTTCAA
AGAATTGCATAAATCAAAGGACAAAGCTGGTACCGAGGTCACAAAGGAAGAATTTATTGAGGTTTTTCAT
GAGCTTTGTACTAGACCTGAAATTTATTTCCTTTTAGTTCAGTTTTCAAGCAATAAAGAATTCCTTGATA
CCAAGGACCTTATGATGTTTCTTGAGGCAGAACAGGGTGTGGCACATATAAATGAGGAAATAAGCCTTGA
AATTATTCACAAATATGAACCATCCAAAGAGGGTCAGGAAAAGGGCTGGCTCTCCATAGACGGGTTCACT
AATTACCTTATGTCACCTGACTGTTATATATTCGATCCAGAACATAAGAAGGTCTGTCAGGATATGAAGC
AACCTCTGTCTCATTACTTTATAAACTCATCTCATAATACATACTTAATAGAGGATCAGTTCCGAGGTCC
CTCCGACATCACAGGATATATTCGAGCTCTTAAAATGGGTTGCCGGAGTGTTGAATTAGATGTATGGGAT
GGGCCGGACAATGAACCTGTAATTTACACAGGCCACACCATGACCTCTCAGATAGTTTTCCGCAGTGTCA
TTGATATTATTAACAAGTATGCATTCTTTGCTTCAGAGTATCCTCTTATCTTGTGTTTAGAAAACCACTG
TTCCATTAAACAACAGAAGGTAATGGTTCAGCACATGAAGAAACTTTTAGGAGACAAGCTCTATACAACA
TCACCCAATGTTGAGGAATCTTATCTACCATCCCCAGATGTCCTGAAAGGGAAAATACTAATTAAAGCAA
AGAAGCTGTCCTCAAATTGCTCTGGGGTAGAAGGAGATGTTACTGACGAAGATGAAGGAGCAGAAATGTC
TCAGAGGATGGGAAAAGAGAACATGGAGCAACCCAATAATGTGCCTGTGAAGCGATTTCAGCTTTGTAAA
GAACTGTCTGAACTGGTCAGCATCTGCAAATCAGTTCAGTTCAAAGAATTTCAGGTGTCGTTTCAGGTTC
AGAAGTACTGGGAAGTCTGTTCCTTTAATGAAGTGCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGGA
CTTTGTAAATTACAACAAACGTTTTCTTGCTAGGGTTTTTCCCAGTCCAATGAGAATTGATTCCAGTAAC
ATGAATCCTCAAGATTTTTGGAAATGTGGTTGCCAAATTGTAGCCATGAACTTTCAGACACCAGGACTGA
TGATGGACCTGAATATTGGCTGGTTTAGGCAGAACGGAAACTGTGGCTATGTCCTCCGGCCAGCCATCAT
GAGGGAGGAGGTCTCCTTCTTCAGCGCCAATACAAAAGACTCTGTCCCAGGGGTCTCACCTCAACTTCTT
CACATTAAAATCATCAGTGGGCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAG
ATCCTTATGTCTATGTTGAAATCCATGGAATCCCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTGCA
CCAGAATGGAGACGCTCCCATTTTTGATGAAAGCTTTGAATTTCAAATCAACCTGCCTGAACTGGCCATG
GTGCGCTTTGTAGTGCTGGATGATGACTACATTGGGGATGAATTCATCGGCCAGTACACAATTCCCTTTG
AATGTTTACAGACGGGCTACCGCCATGTCCCCCTGCAGTCCTTAACTGGAGAGGTCCTTGCACATGCTTC
TTTATTTGTCCACGTGGCTATTACTAACCGAAGAGGAGGAGGAAAGCCTCATAAAAGGGGCCTTTCTGTG
AGAAAAGGGAAGAAATCCAGGGAATATGCATCTTTGAGAACACTGTGGATTAAAACCGTGGATGAGGTAT
TCAAGAATGCCCAGCCCCCTATACGGGATGCCACAGATCTGAGAGAAAACATGCAGAATGCGGTGGTGTC
ATTCAAGGAGCTGTGTGGCCTCTCCTCTGTGGCCAATCTCATGCAGTGCATGTTGGCGGTGTCTCCCCGC
TTTCTGGGGCCCGATAACACACCCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGAGCTGC
AGGGAATTGTGCCGGAGGTTCTGAAGAAGATCGTAACAACTTATGACATGATGATTCAGTCCCTCAAGGC
GTTGATTGAAAATGCAGATGCTGTATATGAAAAGATCGTACATTGTCAGAAGGCAGCCATGGAATTCCAT
GAACACTTGCACAGCATAGGCACCAAGGAAGGTTTGAAGGAAAGAAAACTACAAAAAGCAGTGGAGAGCT
TTACCTGGAATATTACCATCTTAAAGGGACAAGCAGATCTTTTGAAATATGCTAAGAATGAGACATTGGA
GAACCTGAAACAAATCCATTTTGCTGCTGTTTCATGTGGACTGAATAAACCAGGCACCGAAAATGCTGAT
GTCCAGAAGCCACGCCGGAGCTTGGAAGTCATACCCGAAAAAGCAAACGATGAAACTGGAGAATGA

Translation (1001 aa):
MPTEKKISSASDCINSMVEGSELKKVRSNSRIYHRYFLLDADMQSLRWEPSKKDSEKAKIDIKSIKEVRT
GKNTDIFRSNGISDQISEDCAFSVIYGENYESLDLVANSADVANIWVTGLRYLISYGKHTLDMLESSQDN
MRTSWVSQMFSEIDVDNLGHITLCNAVQCIRNLNPGLKTSKIELKFKELHKSKDKAGTEVTKEEFIEVFH
ELCTRPEIYFLLVQFSSNKEFLDTKDLMMFLEAEQGVAHINEEISLEIIHKYEPSKEGQEKGWLSIDGFT
NYLMSPDCYIFDPEHKKVCQDMKQPLSHYFINSSHNTYLIEDQFRGPSDITGYIRALKMGCRSVELDVWD
GPDNEPVIYTGHTMTSQIVFRSVIDIINKYAFFASEYPLILCLENHCSIKQQKVMVQHMKKLLGDKLYTT
SPNVEESYLPSPDVLKGKILIKAKKLSSNCSGVEGDVTDEDEGAEMSQRMGKENMEQPNNVPVKRFQLCK
ELSELVSICKSVQFKEFQVSFQVQKYWEVCSFNEVLASKYANENPGDFVNYNKRFLARVFPSPMRIDSSN
MNPQDFWKCGCQIVAMNFQTPGLMMDLNIGWFRQNGNCGYVLRPAIMREEVSFFSANTKDSVPGVSPQLL
HIKIISGQNFPKPKGSGAKGDVVDPYVYVEIHGIPADCAEQRTKTVHQNGDAPIFDESFEFQINLPELAM
VRFVVLDDDYIGDEFIGQYTIPFECLQTGYRHVPLQSLTGEVLAHASLFVHVAITNRRGGGKPHKRGLSV
RKGKKSREYASLRTLWIKTVDEVFKNAQPPIRDATDLRENMQNAVVSFKELCGLSSVANLMQCMLAVSPR
FLGPDNTPLVVLNLSEQYPTMELQGIVPEVLKKIVTTYDMMIQSLKALIENADAVYEKIVHCQKAAMEFH
EHLHSIGTKEGLKERKLQKAVESFTWNITILKGQADLLKYAKNETLENLKQIHFAAVSCGLNKPGTENAD
VQKPRRSLEVIPEKANDETGE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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