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Report for CCDS33812.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33812.1 Public Homo sapiens 3 CIP2A 24 110 108 CCDS HistoryNCBI Gene:57650Re-query CCDS DB by CCDS ID:33812.1Re-query CCDS DB by GeneID:57650See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33812.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295746.13 ENSP00000295746.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295746.13Link to Ensembl Protein Viewer:ENSP00000295746.7Re-query CCDS DB by Nucleotide ID:ENST00000295746Re-query CCDS DB by Protein ID:ENSP00000295746
Original member Current member NCBI NM_020890.3 NP_065941.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020890.3Link to Protein Sequence:NP_065941.2Re-query CCDS DB by Nucleotide ID:NM_020890Re-query CCDS DB by Protein ID:NP_065941Link to BLAST:NP_065941.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065941.2 905 Q8TCG1-1 905 100% 0 0

Chromosomal Locations for CCDS 33812.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 108551149 108551319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108552234 108552373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108553648 108553730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108554376 108554489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108557218 108557414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108559757 108559867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108559954 108560028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108560649 108560841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108563126 108563244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108565355 108565454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108566497 108566638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108568155 108568314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108569389 108569607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108576271 108576346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108579281 108579426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108579566 108579688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108581415 108581511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108582108 108582202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108582977 108583083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108585065 108585212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108589274 108589375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2718 nt):
ATGGACTCCACTGCCTGCTTGAAGTCCTTGCTCCTGACTGTCAGTCAGTACAAAGCCGTGAAGTCAGAGG
CGAACGCCACTCAGCTTTTGCGGCACTTGGAGGTAATTTCTGGACAGAAACTCACACGACTATTTACATC
AAATCAGATATTAACAAGTGAATGCTTGAGTTGCCTTGTAGAGCTACTTGAAGACCCCAACATAAGTGCT
TCACTGATCTTAAGTATTATCGGTTTGCTGTCTCAACTAGCAGTAGACATTGAAACCAGAGATTGTCTTC
AGAATACATATAATCTGAATAGTGTGCTGGCGGGAGTGGTTTGTCGGAGCAGCCACACTGATTCGGTGTT
TTTGCAGTGCATTCAACTTCTACAGAAGTTAACATATAATGTCAAAATTTTCTATTCTGGTGCCAATATA
GATGAATTAATTACGTTCCTGATAGATCACATTCAATCTTCTGAAGATGAGTTAAAAATGCCTTGTCTAG
GATTATTGGCAAATCTTTGTCGGCACAATCTTTCTGTTCAAACGCACATAAAGACATTGAGTAATGTGAA
ATCTTTTTATCGAACTCTTATCACCTTGTTGGCCCATAGTAGTTTAACTGTGGTTGTGTTTGCACTTTCA
ATATTATCCAGTTTGACATTAAATGAAGAGGTGGGGGAAAAGCTATTCCATGCTCGAAACATTCATCAGA
CTTTTCAACTAATATTTAATATTCTCATAAACGGTGATGGCACTCTAACTAGAAAGTATTCAGTTGACCT
ACTGATGGATCTCCTTAAGAATCCTAAAATTGCTGATTATCTCACCAGATATGAGCACTTTTCTTCATGT
CTTCACCAAGTATTAGGTCTTCTTAATGGAAAGGATCCTGATTCCTCTTCAAAGGTTTTAGAATTACTTC
TTGCCTTCTGTTCAGTGACTCAGCTGCGCCATATGCTCACTCAGATGATGTTTGAACAGTCTCCACCTGG
CAGCGCCACTCTGGGAAGCCATACTAAATGTTTAGAACCTACTGTGGCTCTACTGCGCTGGTTAAGCCAA
CCTTTGGACGGATCAGAAAACTGTTCTGTTTTAGCATTGGAGTTGTTCAAGGAAATATTTGAGGATGTCA
TAGATGCTGCTAACTGTTCCTCGGCTGATCGTTTTGTGACCCTTCTGCTGCCTACAATCCTTGATCAACT
TCAGTTCACAGAACAAAATCTAGATGAGGCTTTAACAAGAAAAAAATGTGAAAGGATTGCCAAGGCCATT
GAAGTTTTGTTAACTCTCTGTGGAGATGATACACTAAAAATGCATATTGCAAAAATCTTGACAACTGTCA
AGTGTACCACTCTTATAGAACAACAATTTACATATGGCAAGATTGACCTGGGATTTGGAACAAAGGTTGC
AGATTCTGAATTATGCAAACTTGCTGCTGATGTAATTTTGAAAACTCTTGATTTGATTAACAAACTTAAA
CCATTGGTTCCTGGTATGGAAGTAAGCTTCTACAAAATACTTCAGGACCCACGTTTGATTACTCCTTTGG
CTTTTGCTTTAACGTCAGATAATAGAGAACAAGTACAGTCTGGACTGAGAATATTATTGGAGGCTGCTCC
ACTGCCAGATTTTCCTGCTTTAGTACTTGGAGAAAGTATAGCAGCAAACAATGCCTATAGACAACAGGAA
ACAGAACATATACCCAGAAAAATGCCCTGGCAATCATCAAATCACAGTTTTCCAACATCAATAAAGTGTT
TAACTCCTCATTTGAAAGATGGTGTTCCTGGATTGAATATTGAAGAATTAATAGAGAAACTTCAGTCTGG
AATGGTGGTAAAGGATCAGATTTGTGATGTGAGAATATCTGACATAATGGATGTATATGAAATGAAACTA
TCCACATTAGCTTCCAAAGAAAGCAGGCTACAAGATCTTTTGGAAACAAAAGCTCTAGCCCTTGCACAGG
CTGATAGACTGATTGCTCAGCATCGCTGTCAAAGAACTCAAGCTGAAACAGAGGCACGGACACTTGCTAG
TATGTTGAGAGAAGTTGAGAGAAAAAATGAAGAGCTTAGTGTGTTGCTGAAGGCGCAGCAAGTTGAATCA
GAAAGAGCGCAGAGTGATATTGAGCATCTCTTTCAACATAATAGGAAGTTAGAGTCTGTGGCTGAAGAAC
ATGAAATACTGACAAAATCCTACATGGAACTTCTTCAGAGAAATGAAAGTACTGAAAAGAAGAATAAAGA
TTTACAGATCACATGTGATTCTCTGAATAAACAAATTGAGACAGTGAAAAAGTTGAATGAGTCACTCAAG
GAACAAAATGAAAAAAGTATTGCCCAATTAATAGAGAAAGAAGAACAGAGAAAAGAAGTACAGAATCAGC
TAGTAGACAGAGAACATAAGCTAGCAAATTTGCATCAAAAAACAAAAGTACAAGAAGAAAAGATTAAAAC
CTTACAAAAGGAAAGGGAAGATAAGGAAGAAACCATTGATATCCTTAGAAAAGAATTAAGCAGAACAGAA
CAGATAAGAAAAGAGTTGAGCATTAAGGCTTCCTCCCTAGAGGTTCAAAAGGCACAATTAGAAGGTCGTT
TGGAAGAGAAAGAGTCCTTGGTGAAACTTCAGCAAGAGGAATTGAACAAACACTCCCACATGATAGCAAT
GATCCACAGTTTAAGTGGTGGAAAAATAAATCCAGAAACTGTGAATCTCAGTATATAG

Translation (905 aa):
MDSTACLKSLLLTVSQYKAVKSEANATQLLRHLEVISGQKLTRLFTSNQILTSECLSCLVELLEDPNISA
SLILSIIGLLSQLAVDIETRDCLQNTYNLNSVLAGVVCRSSHTDSVFLQCIQLLQKLTYNVKIFYSGANI
DELITFLIDHIQSSEDELKMPCLGLLANLCRHNLSVQTHIKTLSNVKSFYRTLITLLAHSSLTVVVFALS
ILSSLTLNEEVGEKLFHARNIHQTFQLIFNILINGDGTLTRKYSVDLLMDLLKNPKIADYLTRYEHFSSC
LHQVLGLLNGKDPDSSSKVLELLLAFCSVTQLRHMLTQMMFEQSPPGSATLGSHTKCLEPTVALLRWLSQ
PLDGSENCSVLALELFKEIFEDVIDAANCSSADRFVTLLLPTILDQLQFTEQNLDEALTRKKCERIAKAI
EVLLTLCGDDTLKMHIAKILTTVKCTTLIEQQFTYGKIDLGFGTKVADSELCKLAADVILKTLDLINKLK
PLVPGMEVSFYKILQDPRLITPLAFALTSDNREQVQSGLRILLEAAPLPDFPALVLGESIAANNAYRQQE
TEHIPRKMPWQSSNHSFPTSIKCLTPHLKDGVPGLNIEELIEKLQSGMVVKDQICDVRISDIMDVYEMKL
STLASKESRLQDLLETKALALAQADRLIAQHRCQRTQAETEARTLASMLREVERKNEELSVLLKAQQVES
ERAQSDIEHLFQHNRKLESVAEEHEILTKSYMELLQRNESTEKKNKDLQITCDSLNKQIETVKKLNESLK
EQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKTLQKEREDKEETIDILRKELSRTE
QIRKELSIKASSLEVQKAQLEGRLEEKESLVKLQQEELNKHSHMIAMIHSLSGGKINPETVNLSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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