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Report for CCDS33981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33981.1 Public Homo sapiens 4 OCIAD2 24 110 108 CCDS HistoryNCBI Gene:132299Re-query CCDS DB by CCDS ID:33981.1Re-query CCDS DB by GeneID:132299See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33981.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000508632.6 ENSP00000423014.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000508632.6Link to Ensembl Protein Viewer:ENSP00000423014.1Re-query CCDS DB by Nucleotide ID:ENST00000508632Re-query CCDS DB by Protein ID:ENSP00000423014
Original member Current member NCBI NM_001014446.3 NP_001014446.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001014446.3Link to Protein Sequence:NP_001014446.1Re-query CCDS DB by Nucleotide ID:NM_001014446Re-query CCDS DB by Protein ID:NP_001014446Link to BLAST:NP_001014446.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001014446.1 154 Q56VL3-1 154 100% 0 0

Chromosomal Locations for CCDS 33981.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 48885484 48885565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48892772 48892889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48894006 48894053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48897804 48897857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48899829 48899925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48904484 48904549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGGCTTCAGCGTCTGCTCGTGGAAACCAAGATAAAGATGCCCATTTTCCACCACCAAGCAAGCAGAGCC
TGTTGTTTTGTCCAAAATCAAAACTGCACATCCACAGAGCAGAGATCTCAAAGATTATGCGAGAATGTCA
GGAAGAAAGTTTCTGGAAGAGAGCTCTGCCTTTTTCTCTTGTAAGCATGCTTGTCACCCAGGGACTAGTC
TACCAAGGTTATTTGGCAGCTAATTCTAGATTTGGATCATTGCCCAAAGTTGCACTTGCTGGTCTCTTGG
GATTTGGCCTTGGAAAGGTATCATACATAGGAGTATGCCAGAGTAAATTCCATTTTTTTGAAGATCAGCT
CCGTGGGGCTGGTTTTGGTCCACAGCATAACAGGCACTGCCTCCTTACCTGTGAGGAATGCAAAATAAAG
CATGGATTAAGTGAGAAGGGAGACTCTCAGCCTTCAGCTTCCTAA

Translation (154 aa):
MASASARGNQDKDAHFPPPSKQSLLFCPKSKLHIHRAEISKIMRECQEESFWKRALPFSLVSMLVTQGLV
YQGYLAANSRFGSLPKVALAGLLGFGLGKVSYIGVCQSKFHFFEDQLRGAGFGPQHNRHCLLTCEECKIK
HGLSEKGDSQPSAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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