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Report for CCDS34035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34035.1 Public Homo sapiens 4 DNAJB14 24 110 108 CCDS HistoryNCBI Gene:79982Re-query CCDS DB by CCDS ID:34035.1Re-query CCDS DB by GeneID:79982See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34035.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000442697.7 ENSP00000404381.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000442697.7Link to Ensembl Protein Viewer:ENSP00000404381.2Re-query CCDS DB by Nucleotide ID:ENST00000442697Re-query CCDS DB by Protein ID:ENSP00000404381
Original member Current member NCBI NM_001031723.4 NP_001026893.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031723.4Link to Protein Sequence:NP_001026893.1Re-query CCDS DB by Nucleotide ID:NM_001031723Re-query CCDS DB by Protein ID:NP_001026893Link to BLAST:NP_001026893.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026893.1 379 Q8TBM8-1 379 100% 0 0

Chromosomal Locations for CCDS 34035.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 99901028 99901152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99903726 99903898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99905597 99905706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99906517 99906611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99908711 99908896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99923040 99923185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99930450 99930621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99946439 99946571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGGAGGGGAACAGGGATGAGGCTGAGAAATGTGTCGAGATCGCCCGGGAGGCCCTGAACGCCGGCAACC
GCGAGAAGGCCCAGCGCTTCCTGCAGAAGGCCGAGAAGCTCTACCCACTGCCCTCGGCCCGCGCACTATT
GGAAATAATTATGAAAAATGGAAGCACGGCTGGAAATAGCCCTCATTGCCGAAAACCATCAGGTAGTGGC
GATCAAAGCAAGCCTAATTGCACAAAGGACAGCACATCTGGTAGTGGTGAAGGTGGAAAAGGCTATACCA
AAGACCAAGTAGATGGAGTTCTCAGCATAAACAAATGTAAAAATTACTATGAAGTACTTGGAGTTACGAA
AGATGCTGGTGATGAAGATTTGAAAAAAGCTTATAGAAAGCTTGCTTTGAAGTTTCATCCAGACAAAAAC
CATGCACCTGGAGCAACAGATGCTTTTAAAAAGATTGGAAATGCTTATGCTGTTTTAAGTAATCCAGAAA
AGCGAAAACAGTATGACCTCACGGGCAATGAAGAACAAGCATGTAACCACCAAAACAATGGCAGATTTAA
TTTCCATAGAGGTTGTGAAGCTGATATAACTCCAGAAGACTTGTTTAATATATTTTTTGGGGGTGGATTT
CCTTCAGGTAGTGTACATTCTTTTTCAAATGGAAGAGCTGGTTATAGCCAACAACATCAGCATCGACATA
GTGGACATGAAAGAGAAGAGGAAAGAGGAGATGGAGGTTTTTCTGTGTTTATCCAGCTGATGCCCATAAT
TGTATTGATCCTCGTGTCATTATTAAGCCAGTTGATGGTCTCTAATCCTCCTTATTCCTTATATCCCAGA
TCTGGAACTGGGCAAACTATTAAAATGCAAACAGAAAACTTGGGTGTTGTTTATTATGTCAACAAGGACT
TCAAAAATGAATATAAAGGAATGTTATTACAAAAGGTAGAAAAGAGTGTGGAGGAAGATTATGTGACTAA
TATTCGAAATAACTGCTGGAAAGAAAGACAACAAAAAACAGATATGCAGTATGCAGCAAAAGTATACCGT
GATGATCGACTCCGAAGGAAGGCAGATGCCTTGAGCATGGACAACTGTAAAGAATTAGAGCGGCTTACCA
GTCTTTATAAAGGAGGATGA

Translation (379 aa):
MEGNRDEAEKCVEIAREALNAGNREKAQRFLQKAEKLYPLPSARALLEIIMKNGSTAGNSPHCRKPSGSG
DQSKPNCTKDSTSGSGEGGKGYTKDQVDGVLSINKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKN
HAPGATDAFKKIGNAYAVLSNPEKRKQYDLTGNEEQACNHQNNGRFNFHRGCEADITPEDLFNIFFGGGF
PSGSVHSFSNGRAGYSQQHQHRHSGHEREEERGDGGFSVFIQLMPIIVLILVSLLSQLMVSNPPYSLYPR
SGTGQTIKMQTENLGVVYYVNKDFKNEYKGMLLQKVEKSVEEDYVTNIRNNCWKERQQKTDMQYAAKVYR
DDRLRRKADALSMDNCKELERLTSLYKGG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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