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Report for CCDS34323.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34323.1 Public Homo sapiens 5 OR2Y1 24 110 108 CCDS HistoryNCBI Gene:134083Re-query CCDS DB by CCDS ID:34323.1Re-query CCDS DB by GeneID:134083See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34323.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307832.3 ENSP00000312403.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307832.3Link to Ensembl Protein Viewer:ENSP00000312403.2Re-query CCDS DB by Nucleotide ID:ENST00000307832Re-query CCDS DB by Protein ID:ENSP00000312403
Original member Current member NCBI NM_001001657.1 NP_001001657.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001657.1Link to Protein Sequence:NP_001001657.1Re-query CCDS DB by Nucleotide ID:NM_001001657Re-query CCDS DB by Protein ID:NP_001001657Link to BLAST:NP_001001657.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001657.1 311 Q8NGV0 311 100% 0 0

Chromosomal Locations for CCDS 34323.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 180739123 180740058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGGAAGTTTCAACACCAGTTTTGAAGATGGCTTCATTTTGGTGGGATTCTCAGATTGGCCGCAACTGG
AG
CCCATCCTGTTTGTCTTTATTTTTATTTTCTACTCCCTAACTCTCTTTGGCAACACCATCATCATCGC
T
CTCTCCTGGCTAGACCTTCGGCTGCACACACCTATGTACTTCTTTCTCTCTCATCTGTCCCTCCTGGAC
CTC
TGCTTCACCACCAGCACCGTGCCCCAGCTCCTGATCAACCTTTGCGGGGTGGACCGCACCATCACCC
GT
GGAGGGTGTGTGGCTCAGCTCTTCATCTACCTAGCCCTGGGCTCCACAGAGTGTGTGCTCCTGGTGGT
G
ATGGCCTTTGACCGCTATGCTGCTGTCTGTCGTCCACTCCACTACATGGCCATCATGCACCCCCATCTC
TGC
CAGACCCTGGCTATCGCCTCCTGGGGTGCGGGTTTCGTGAACTCTCTGATCCAGACAGGTCTCGCAA
TG
GCCATGCCTCTCTGTGGCCATCGACTGAATCACTTCTTCTGTGAGATGCCTGTATTTCTGAAGTTGGC
T
TGTGCGGACACAGAAGGAACAGAGGCCAAGATGTTTGTGGCCCGAGTCATAGTCGTGGCTGTTCCTGCA
GCA
CTTATTCTAGGCTCCTATGTGCACATTGCTCATGCAGTGCTGAGGGTGAAGTCAACGGCTGGGCGCA
GA
AAGGCTTTTGGGACTTGTGGGTCCCACCTCCTAGTAGTTTTCCTTTTTTATGGCTCAGCCATCTACAC
A
TATCTCCAATCCATCCACAATTATTCTGAGCGTGAGGGAAAATTTGTTGCCCTTTTTTATACTATAATT
ACC
CCCATTCTCAATCCTCTCATTTATACACTAAGAAACAAGGACGTGAAGGGGGCTCTGTGGAAAGTAC
TA
TGGAGGGGCAGGGACTCAGGGTAG


Translation (311 aa):
MGSFNTSFEDGFILVGFSDWPQLEPILFVFIFIFYSLTLFGNTIIIALSWLDLRLHTPMYFFLSHLSLLD
L
CFTTSTVPQLLINLCGVDRTITRGGCVAQLFIYLALGSTECVLLVVMAFDRYAAVCRPLHYMAIMHPHL
C
QTLAIASWGAGFVNSLIQTGLAMAMPLCGHRLNHFFCEMPVFLKLACADTEGTEAKMFVARVIVVAVPA
A
LILGSYVHIAHAVLRVKSTAGRRKAFGTCGSHLLVVFLFYGSAIYTYLQSIHNYSEREGKFVALFYTII
T
PILNPLIYTLRNKDVKGALWKVLWRGRDSG




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser