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Report for CCDS34405.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34405.1 Public Homo sapiens 6 MPIG6B 24 110 108 CCDS HistoryNCBI Gene:80739Re-query CCDS DB by CCDS ID:34405.1Re-query CCDS DB by GeneID:80739See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34405.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375814.7 ENSP00000364972.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375814.7Link to Ensembl Protein Viewer:ENSP00000364972.3Re-query CCDS DB by Nucleotide ID:ENST00000375814Re-query CCDS DB by Protein ID:ENSP00000364972
Original member Current member NCBI NM_138275.3 NP_612119.1 Accepted alive Link to Nucleotide Sequence:NM_138275.3Link to Protein Sequence:NP_612119.1Re-query CCDS DB by Nucleotide ID:NM_138275Re-query CCDS DB by Protein ID:NP_612119Link to BLAST:NP_612119.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612119.1 197 O95866-5 197 100% 0 0

Chromosomal Locations for CCDS 34405.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31723384 31723444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31723639 31723986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31724765 31724844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31724970 31725074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGGCTGTGTTTCTGCAGCTGCTACCGCTGCTGCTCTCGAGGGCCCAAGGGAACCCTGGGGCTTCTCTGG
ACGGCCGCCCTGGGGACCGGGTGAATCTCTCCTGCGGAGGAGTCTCTCATCCCATCCGCTGGGTCTGGGC
ACCCAGCTTCCCGGCCTGCAAGGGCCTGTCCAAAGGACGCCGACCGATCCTGTGGGCCTCTTCGAGCGGG
ACCCCCACCGTGCCTCCCCTCCAGCCTTTCGTCGGCCGCCTACGCTCCCTGGACTCTGGTATCCGGCGGC
TGGAGCTCCTCTTGAGCGCGGGGGACTCGGGCACTTTTTTCTGCAAGGGCCGCCACGAGGACGAGAGCCG
TACAGTGCTTCACGTGCTGGGGGACAGGACCTATTGCAAGGCCCCCGGGCCTACCCATGCTCCACTTGTG
AAAACCGAGCCCCAGAGGCCAGTAAAGGAGGAAGAGCCCAAGATTCCAGGGGACCTGGACCAGGAACCGA
GCCTGCTCTATGCGGATCTGGACCATCTAGCCCTCAGCAGGCCCCGCCGGCTGTCCACAGCGGACCCTGC
TGATGCCTCCACCATCTATGCAGTTGTAGTTTGA

Translation (197 aa):
MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSG
TPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVLHVLGDRTYCKAPGPTHAPLV
KTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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