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Report for CCDS34529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34529.1 Public Homo sapiens 6 CENPW 24 110 108 CCDS HistoryNCBI Gene:387103Re-query CCDS DB by CCDS ID:34529.1Re-query CCDS DB by GeneID:387103See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34529.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368328.5 ENSP00000357311.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368328.5Link to Ensembl Protein Viewer:ENSP00000357311.4Re-query CCDS DB by Nucleotide ID:ENST00000368328Re-query CCDS DB by Protein ID:ENSP00000357311
Original member Current member NCBI NM_001012507.4 NP_001012525.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012507.4Link to Protein Sequence:NP_001012525.1Re-query CCDS DB by Nucleotide ID:NM_001012507Re-query CCDS DB by Protein ID:NP_001012525Link to BLAST:NP_001012525.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012525.1 88 Q5EE01-1 88 100% 0 0

Chromosomal Locations for CCDS 34529.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 126340274 126340399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 126346205 126346318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 126348466 126348492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (267 nt):
ATGGCGCTGTCGACCATAGTCTCCCAGAGGAAGCAGATAAAGCGGAAGGCTCCCCGTGGCTTTCTAAAGC
GAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTGGTGACTTATTGGTCCATCTGAACTG
TTTACTGTTTGTTCATCGATTAGCAGAAGAGTCCAGGACAAACGCTTGTGCGAGTAAATGTAGAGTCATT
AACAAGGAGCATGTACTGGCCGCAGCAAAGGTAATTCTAAAGAAGAGCAGAGGTTAG

Translation (88 aa):
MALSTIVSQRKQIKRKAPRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRTNACASKCRVI
NKEHVLAAAKVILKKSRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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