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Report for CCDS34531.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34531.1 Public Homo sapiens 6 KIAA0408 24 110 108 CCDS HistoryNCBI Gene:9729Re-query CCDS DB by CCDS ID:34531.1Re-query CCDS DB by GeneID:9729See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34531.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000483725.8 ENSP00000435150.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000483725.8Link to Ensembl Protein Viewer:ENSP00000435150.2Re-query CCDS DB by Nucleotide ID:ENST00000483725Re-query CCDS DB by Protein ID:ENSP00000435150
Original member Current member NCBI NM_014702.5 NP_055517.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014702.5Link to Protein Sequence:NP_055517.3Re-query CCDS DB by Nucleotide ID:NM_014702Re-query CCDS DB by Protein ID:NP_055517Link to BLAST:NP_055517.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055517.3 694 Q6ZU52-1 694 100% 0 0

Chromosomal Locations for CCDS 34531.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 127444109 127444282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127446408 127447740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127449822 127449901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127449990 127450352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127453847 127453981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2085 nt):
ATGGACCTACATAAGCAGTGGGAGAACACAGAGACTAACTGGCATAAGGAAAAGATGGAATTACTGGACC
AGTTTGACAATGAAAGAAAGGAATGGGAAAGTCAATGGAAGATTATGCAGAAGAAAATAGAAGAGCTTTG
CCGGGAAGTAAAGCTTTGGAGGAAAATCAATATCAATGAAAGTGCTAAGATCATTGATCTTTACCATGAG
AAGACCATTCCAGAGAAAGTGATAGAATCTTCCCCAAATTACCCCGATTTAGGACAAAGTGAATTTATAA
GGACGAATCACAAAGATGGTCTGAGAAAAGAAAATAAAAGAGAGCAGAGCTTAGTCAGTGGAGGAAATCA
AATGTGTAAGGAACAAAAAGCAACAAAAAAATCAAAAGTAGGGTTTTTGGATCCTTTGGCTACAGACAAC
CAAAAGGAATGTGAGGCCTGGCCTGACCTGAGGACTTCTGAGGAAGACAGCAAGAGCTGTTCTGGCGCCC
TCAGTACAGCTCTTGAAGAACTTGCGAAGGTGAGTGAAGAATTATGCAGCTTTCAAGAGGAAATTCGAAA
GCGGTCTAACCATAGAAGGATGAAGTCAGATTCTTTTCTCCAGGAAATGCCAAATGTAACTAATATACCT
CATGGGGACCCCATGATCAACAATGACCAGTGCATTCTTCCAATCAGTTTAGAAAAAGAAAAACAGAAAA
ACAGGAAGAATCTGAGCTGTACCAATGTGCTCCAGAGCAATTCTACGAAAAAATGTGGAATTGATACAAT
CGATTTAAAAAGAAATGAAACTCCACCAGTTCCTCCTCCAAGAAGCACCTCTCGAAATTTTCCCAGCTCG
GATTCTGAACAAGCCTATGAAAGATGGAAGGAAAGGTTAGACCACAACAGCTGGGTGCCCCATGAGGGTC
GAAGTAAAAGGAATTACAACCCTCACTTCCCTTTGAGACAACAAGAGATGTCTATGTTGTATCCAAATGA
AGGGAAAACTTCGAAAGATGGTATCATCTTTTCCTCTTTGGTACCAGAAGTCAAAATAGATAGCAAGCCT
CCAAGTAATGAAGATGTTGGACTTAGCATGTGGTCATGTGACATTGGGATAGGTGCAAAAAGGAGCCCCT
CTACTTCGTGGTTTCAGAAAACCTGCTCTACCCCCAGTAATCCAAAATATGAAATGGTGATCCCAGATCA
CCCTGCTAAATCTCATCCTGATCTTCATGTAAGTAATGACTGTAGCTCCTCAGTAGCAGAGAGCAGTAGC
CCACTTAGAAATTTCAGTTGTGGCTTTGAAAGGACTACAAGGAATGAGAAGCTGGCAGCAAAGACTGATG
AATTTAACAGAACTGTATTTAGAACAGATAGAAATTGTCAGGCAATACAGCAAAATCACAGCTGCTCAAA
ATCATCGGAGGATCTCAAGCCCTGTGATACCTCATCTACTCACACAGGTAGCATATCACAAAGTAACGAT
GTGTCCGGTATTTGGAAAACCAATGCCCACATGCCTGTGCCCATGGAAAATGTGCCTGATAATCCCACCA
AGAAATCCACAACAGGCCTAGTAAGACAAATGCAGGGACACCTAAGTCCTCGCAGTTATCGAAATATGCT
CCACGAGCATGACTGGAGACCGAGTAATTTGTCTGGCCGTCCGAGGTCAGCTGATCCCAGGTCAAATTAT
GGTGTTGTGGAAAAGCTGCTGAAAACCTATGAGACAGCAACAGAGTCTGCATTGCAAAATTCTAAGTGCT
TCCAGGATAATTGGACCAAATGTAATTCTGATGTCAGTGGTGGTGCCACATTAAGTCAGCATTTAGAAAT
GCTCCAAATGGAACAACAGTTTCAGCAAAAGACAGCTGTGTGGGGGGGACAGGAAGTGAAGCAAGGAATA
GATCCGAAAAAGATAACAGAGGAATCCATGTCAGTGAACGCCTCACATGGAAAAGGATTTTCCCGACCTG
CTAGACCAGCAAATCGTCGTCTCCCCTCCAGATGGGCATCCAGATCTCCATCTGCACCCCCTGCCTTGCG
GAGAACTACCCACAACTATACCATTTCTCTGCGATCCGAAGCATTGATGGTTTAA

Translation (694 aa):
MDLHKQWENTETNWHKEKMELLDQFDNERKEWESQWKIMQKKIEELCREVKLWRKININESAKIIDLYHE
KTIPEKVIESSPNYPDLGQSEFIRTNHKDGLRKENKREQSLVSGGNQMCKEQKATKKSKVGFLDPLATDN
QKECEAWPDLRTSEEDSKSCSGALSTALEELAKVSEELCSFQEEIRKRSNHRRMKSDSFLQEMPNVTNIP
HGDPMINNDQCILPISLEKEKQKNRKNLSCTNVLQSNSTKKCGIDTIDLKRNETPPVPPPRSTSRNFPSS
DSEQAYERWKERLDHNSWVPHEGRSKRNYNPHFPLRQQEMSMLYPNEGKTSKDGIIFSSLVPEVKIDSKP
PSNEDVGLSMWSCDIGIGAKRSPSTSWFQKTCSTPSNPKYEMVIPDHPAKSHPDLHVSNDCSSSVAESSS
PLRNFSCGFERTTRNEKLAAKTDEFNRTVFRTDRNCQAIQQNHSCSKSSEDLKPCDTSSTHTGSISQSND
VSGIWKTNAHMPVPMENVPDNPTKKSTTGLVRQMQGHLSPRSYRNMLHEHDWRPSNLSGRPRSADPRSNY
GVVEKLLKTYETATESALQNSKCFQDNWTKCNSDVSGGATLSQHLEMLQMEQQFQQKTAVWGGQEVKQGI
DPKKITEESMSVNASHGKGFSRPARPANRRLPSRWASRSPSAPPALRRTTHNYTISLRSEALMV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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