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Report for CCDS34579.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34579.1 Public Homo sapiens 7 PRKAR1B 24 110 108 CCDS HistoryNCBI Gene:5575Re-query CCDS DB by CCDS ID:34579.1Re-query CCDS DB by GeneID:5575See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34579.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360274.8 ENSP00000353415.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360274.8Link to Ensembl Protein Viewer:ENSP00000353415.4Re-query CCDS DB by Nucleotide ID:ENST00000360274Re-query CCDS DB by Protein ID:ENSP00000353415
Original member Current member EBI ENST00000403562.5 ENSP00000385349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403562.5Link to Ensembl Protein Viewer:ENSP00000385349.1Re-query CCDS DB by Nucleotide ID:ENST00000403562Re-query CCDS DB by Protein ID:ENSP00000385349
Original member Current member EBI ENST00000406797.5 ENSP00000385749.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406797.5Link to Ensembl Protein Viewer:ENSP00000385749.1Re-query CCDS DB by Nucleotide ID:ENST00000406797Re-query CCDS DB by Protein ID:ENSP00000385749
Original member Current member EBI ENST00000537384.6 ENSP00000440449.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000537384.6Link to Ensembl Protein Viewer:ENSP00000440449.1Re-query CCDS DB by Nucleotide ID:ENST00000537384Re-query CCDS DB by Protein ID:ENSP00000440449
Original member Current member EBI ENST00000544935.5 ENSP00000444487.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544935.5Link to Ensembl Protein Viewer:ENSP00000444487.1Re-query CCDS DB by Nucleotide ID:ENST00000544935Re-query CCDS DB by Protein ID:ENSP00000444487
Original member Current member NCBI NM_001164758.2 NP_001158230.1 Accepted alive Link to Nucleotide Sequence:NM_001164758.2Link to Protein Sequence:NP_001158230.1Re-query CCDS DB by Nucleotide ID:NM_001164758Re-query CCDS DB by Protein ID:NP_001158230Link to BLAST:NP_001158230.1
Original member Current member NCBI NM_001164759.1 NP_001158231.1 Accepted alive Link to Nucleotide Sequence:NM_001164759.1Link to Protein Sequence:NP_001158231.1Re-query CCDS DB by Nucleotide ID:NM_001164759Re-query CCDS DB by Protein ID:NP_001158231Link to BLAST:NP_001158231.1
Original member Current member NCBI NM_001164760.2 NP_001158232.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001164760.2Link to Protein Sequence:NP_001158232.1Re-query CCDS DB by Nucleotide ID:NM_001164760Re-query CCDS DB by Protein ID:NP_001158232Link to BLAST:NP_001158232.1
Original member Current member NCBI NM_001164761.2 NP_001158233.1 Accepted alive Link to Nucleotide Sequence:NM_001164761.2Link to Protein Sequence:NP_001158233.1Re-query CCDS DB by Nucleotide ID:NM_001164761Re-query CCDS DB by Protein ID:NP_001158233Link to BLAST:NP_001158233.1
Original member Current member NCBI NM_001164762.2 NP_001158234.1 Accepted alive Link to Nucleotide Sequence:NM_001164762.2Link to Protein Sequence:NP_001158234.1Re-query CCDS DB by Nucleotide ID:NM_001164762Re-query CCDS DB by Protein ID:NP_001158234Link to BLAST:NP_001158234.1
Original member Current member NCBI NM_002735.3 NP_002726.1 Accepted alive Link to Nucleotide Sequence:NM_002735.3Link to Protein Sequence:NP_002726.1Re-query CCDS DB by Nucleotide ID:NM_002735Re-query CCDS DB by Protein ID:NP_002726Link to BLAST:NP_002726.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158230.1 381 P31321 381 100% 0 0
NP_001158231.1 381 P31321 381 100% 0 0
NP_001158232.1 381 P31321 381 100% 0 0
NP_001158233.1 381 P31321 381 100% 0 0
NP_001158234.1 381 P31321 381 100% 0 0
NP_002726.1 381 P31321 381 100% 0 0

Chromosomal Locations for CCDS 34579.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 550430 550602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 551389 551470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 579256 579377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 584508 584568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 596146 596304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 606193 606239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 607391 607452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 677229 677320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 680556 680726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 711329 711505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGGCCTCCCCGCCCGCCTGCCCCTCGGAGGAGGACGAGAGCCTGAAGGGCTGTGAGCTGTACGTGCAGC
TGCACGGGATCCAGCAGGTCCTCAAAGACTGTATCGTCCACCTCTGCATCTCCAAGCCCGAACGCCCCAT
GAAGTTCCTCCGGGAGCACTTCGAGAAGCTGGAGAAGGAAGAAAACAGGCAGATTTTGGCGCGGCAAAAG
TCAAACTCACAGTCGGACTCCCATGATGAGGAGGTGTCGCCCACCCCCCCGAACCCTGTGGTGAAGGCCC
GCCGCCGGCGAGGAGGCGTGAGTGCCGAGGTGTACACCGAGGAGGACGCCGTGTCCTACGTCAGGAAGGT
GATTCCCAAGGACTACAAAACCATGACTGCGCTGGCCAAGGCCATCTCCAAGAACGTGCTCTTCGCTCAC
CTGGATGACAACGAGAGGAGTGACATATTCGATGCCATGTTCCCTGTCACTCACATCGCTGGGGAGACTG
TTATACAGCAAGGGAATGAAGGAGACAACTTCTATGTCGTTGATCAAGGGGAAGTGGATGTGTACGTGAA
CGGAGAGTGGGTGACCAACATCAGCGAGGGAGGCAGCTTCGGGGAGCTGGCGCTCATCTACGGCACCCCC
AGGGCTGCGACCGTGAAAGCCAAGACGGACCTCAAGCTCTGGGGGATCGACCGGGACAGCTACCGGCGCA
TCCTTATGGGCAGCACGCTGAGGAAACGCAAGATGTACGAGGAGTTCCTCAGCAAGGTCTCCATCCTAGA
GTCCCTGGAGAAGTGGGAGCGTCTGACCGTGGCGGATGCGCTGGAGCCCGTCCAGTTTGAAGATGGAGAG
AAAATTGTGGTCCAGGGAGAGCCTGGGGACGACTTTTACATCATCACGGAGGGCACCGCGTCCGTGCTGC
AGCGCCGGTCCCCCAATGAGGAGTACGTGGAGGTGGGGCGCCTGGGACCCTCTGACTACTTCGGGGAGAT
TGCACTGCTGCTGAACCGGCCCCGGGCGGCCACTGTCGTGGCCCGGGGGCCCCTCAAGTGTGTGAAGCTG
GACCGGCCCCGCTTCGAGCGTGTGCTGGGGCCCTGCTCTGAGATCCTCAAGAGGAACATTCAGCGTTACA
ACAGCTTCATCTCCCTCACCGTCTGA

Translation (381 aa):
MASPPACPSEEDESLKGCELYVQLHGIQQVLKDCIVHLCISKPERPMKFLREHFEKLEKEENRQILARQK
SNSQSDSHDEEVSPTPPNPVVKARRRRGGVSAEVYTEEDAVSYVRKVIPKDYKTMTALAKAISKNVLFAH
LDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYVNGEWVTNISEGGSFGELALIYGTP
RAATVKAKTDLKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGE
KIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVARGPLKCVKL
DRPRFERVLGPCSEILKRNIQRYNSFISLTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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