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Report for CCDS34589.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34589.1 Public Homo sapiens 7 AMZ1 24 110 108 CCDS HistoryNCBI Gene:155185Re-query CCDS DB by CCDS ID:34589.1Re-query CCDS DB by GeneID:155185See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34589.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312371.8 ENSP00000308149.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312371.8Link to Ensembl Protein Viewer:ENSP00000308149.4Re-query CCDS DB by Nucleotide ID:ENST00000312371Re-query CCDS DB by Protein ID:ENSP00000308149
Original member Current member EBI ENST00000683327.1 ENSP00000506962.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683327.1Link to Ensembl Protein Viewer:ENSP00000506962.1Re-query CCDS DB by Nucleotide ID:ENST00000683327Re-query CCDS DB by Protein ID:ENSP00000506962
Original member Current member NCBI NM_001384743.1 NP_001371672.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001384743.1Link to Protein Sequence:NP_001371672.1Re-query CCDS DB by Nucleotide ID:NM_001384743Re-query CCDS DB by Protein ID:NP_001371672Link to BLAST:NP_001371672.1
Original member Current member NCBI NM_133463.4 NP_597720.1 Accepted alive Link to Nucleotide Sequence:NM_133463.4Link to Protein Sequence:NP_597720.1Re-query CCDS DB by Nucleotide ID:NM_133463Re-query CCDS DB by Protein ID:NP_597720Link to BLAST:NP_597720.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371672.1 498 Q400G9-1 498 100% 0 0
NP_597720.1 498 Q400G9-1 498 100% 0 0

Chromosomal Locations for CCDS 34589.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 2700452 2700755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2702722 2702889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2708588 2708716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2709075 2709244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2709640 2709816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2712330 2712878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCA
CTGACGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGC
CTACAACCCGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGA
CCCGAGGCTCCCGAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGA
AGCACATCTACCTACAGCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTG
CAGCTGCACAGAGGCCTTCTTCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATC
CGCTGCTCCTCGCGGCCCAGCCGGGACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCT
TGAAGAACAACAAGCCAGGGGACGCGCTGTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGA
GGCCTGGAGCTTCACCTTCAGCAAGTTCCTTCCAGGGCACGAAGTGGGCGTCTGCAGCTTCGCCCGGTTC
TCAGGGGAATTCCCGAAGTCGGGGCCCAGCGCCCCTGATCTGGCCCTGGTAGAGGCAGCAGCAGACGGCC
CCGAGGCCCCCCTGCAGGACAGGGGCTGGGCCCTGTGCTTCAGTGCCCTGGGGATGGTTCAGTGCTGCAA
GGTCACGTGCCACGAGCTCTGCCACCTTCTGGGCCTGGGGAACTGCCGCTGGCTCCGCTGCCTCATGCAG
GGTGCGCTCAGCCTGGACGAGGCCCTGCGGCGGCCCCTGGACCTCTGTCCCATCTGCCTGAGGAAGCTGC
AGCATGTCCTGGGTTTCAGGCTCATCGAGAGGTACCAGAGACTCTACACCTGGACTCAGGCGGTGGTGGG
GACGTGGCCCAGCCAGGAGGCGGGGGAGCCGTCAGTGTGGGAGGACACCCCGCCTGCCAGCGCCGACTCG
GGCATGTGCTGTGAGAGTGACTCGGAGCCCGGCACCAGTGTGTCGGAGCCCCTCACCCCTGATGCCGGGA
GTCACACCTTCGCCTCGGGGCCAGAGGAAGGGCTGAGCTACCTGGCAGCCTCAGAGGCTCCGCTGCCACC
TGGGGGCCCTGCGGAGGCCATCAAGGAGCATGAACGGTGGCTGGCCATGTGCATCCAGGCCCTGCAGCGG
GAAGTGGCAGAGGAGGACCTGGTGCAGGTGGACAGAGCCGTGGACGCCCTCGACCGCTGGGAGATGTTCA
CGGGCCAGCTCCCGGCCACCAGGCAGGACCCACCCAGCAGCAGGGACAGCGTGGGGCTGCGCAAGGTGCT
GGGGGACAAGTTCTCCTCCCTGAGGAGGAAGCTGAGTGCCCGAAAACTCGCCAGAGCAGAGTCGGCCCCC
CGTCCCTGGGATGGGGAAGAGAGTTAG

Translation (498 aa):
MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSR
PEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCTEAFFLGLRVKCLPSVAAASI
RCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFTFSKFLPGHEVGVCSFARF
SGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQ
GALSLDEALRRPLDLCPICLRKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADS
GMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR
EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSARKLARAESAP
RPWDGEES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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