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Report for CCDS34599.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34599.1 Public Homo sapiens 7 FAM220A 24 110 108 CCDS HistoryNCBI Gene:84792Re-query CCDS DB by CCDS ID:34599.1Re-query CCDS DB by GeneID:84792See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34599.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313324.9 ENSP00000317289.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313324.9Link to Ensembl Protein Viewer:ENSP00000317289.4Re-query CCDS DB by Nucleotide ID:ENST00000313324Re-query CCDS DB by Protein ID:ENSP00000317289
Original member Current member NCBI NM_001037163.2 NP_001032240.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001037163.2Link to Protein Sequence:NP_001032240.1Re-query CCDS DB by Nucleotide ID:NM_001037163Re-query CCDS DB by Protein ID:NP_001032240Link to BLAST:NP_001032240.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032240.1 259 Q7Z4H9 259 100% 0 0

Chromosomal Locations for CCDS 34599.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6330375 6331154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGAGGGACAGAAGAGGGCCCCTCGGCACCTGCCTGGCACAAGTGCAGCAGGCCGGAGGAGGTGACTCGG
AC
AAACTATCATGCAGCCTTAAGAAAAGAATGCCGGAGGGCCCTTGGCCTGCAGATGCACCCTCCTGGAT
G
AATAAGCCTGTGGTTGATGGAAATTCACAAAGTGAGGCATTATCACTGGAAATGAGAAAGGATCCGAGC
GGG
GCTGGCCTCTGGCTTCACAGTGGCGGCCCAGTGCTTCCATATGTGAGAGAATCAGTAAGAAGAAATC
CA
GCCTCAGCAGCCACTCCGAGCACAGCCGTGGGTTTGTTCCCTGCTCCAACAGAGTGTTTTGCTCGGGT
G
TCCTGCAGTGGTGTTGAAGCTCTGGGGCGGCGAGACTGGCTGGGAGGAGGGCCCAGGGCCACTGACGGC
CAC
AGAGGACAGTGCCCCAAAGGAGAGCCTCGGGTGTCACGACTGCCACGCCATCAAAAAGTGCCGGAAA
TG
GGAAGTTTTCAGGATGACCCACCAAGTGCTTTTCCCAAGGGTCTGGGCTCTGAGTTGGAACCCGCTTG
C
CTGCACTCCATCCTGTCTGCAACGCTGCACGTGTATCCCGAAGTGCTCCTGAGTGAGGAGACAAAACGC
ATT
TTCCTTGACCGTTTAAAGCCCATGTTTTCAAAGCAAACAATAGAATTCAAGAAAATGCTTAAAAGCA
CC
TCAGATGGTCTGCAGATAACACTGGGGTTACTGGCTCTGCAACCTTTTGAATTAGCAAATACATTATG
C
CATAGTTAA


Translation (259 aa):
MRDRRGPLGTCLAQVQQAGGGDSDKLSCSLKKRMPEGPWPADAPSWMNKPVVDGNSQSEALSLEMRKDPS
G
AGLWLHSGGPVLPYVRESVRRNPASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDG
H
RGQCPKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLGSELEPACLHSILSATLHVYPEVLLSEETKR
I
FLDRLKPMFSKQTIEFKKMLKSTSDGLQITLGLLALQPFELANTLCHS




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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