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Report for CCDS34639.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34639.2 Public Homo sapiens 7 ZNF713 24 110 108 CCDS HistoryNCBI Gene:349075Re-query CCDS DB by CCDS ID:34639.2Re-query CCDS DB by GeneID:349075See the combined annotation on chromosome 7 in Sequence Viewer

Public Note for CCDS 34639.1
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript and conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 34639.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000429591.4 ENSP00000416662.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000429591.4Link to Ensembl Protein Viewer:ENSP00000416662.3Re-query CCDS DB by Nucleotide ID:ENST00000429591Re-query CCDS DB by Protein ID:ENSP00000416662
Original member Current member NCBI NM_182633.3 NP_872439.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182633.3Link to Protein Sequence:NP_872439.2Re-query CCDS DB by Nucleotide ID:NM_182633Re-query CCDS DB by Protein ID:NP_872439Link to BLAST:NP_872439.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872439.2 443 Q8N859 443 100% 0 0

Chromosomal Locations for CCDS 34639.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 55912637 55912723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55923162 55923288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55923607 55923699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55938982 55940006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1332 nt):
ATGCCTTCTCAGAATGCTGTTTTTTCTCAGGAGGGGAACATGGAGGAGGAAGAAATGAATGATGGCTCAC
AGATGGTGAGATCTCAGGAATCACTGACGTTTCAGGATGTGGCCGTGGACTTCACCAGAGAGGAGTGGGA
CCAGCTGTACCCTGCCCAAAAGAACCTCTATCGAGACGTGATGCTGGAGAACTACAGGAATCTAGTTGCA
CTGGGGTATCAGCTTTGTAAGCCAGAGGTAATCGCGCAGTTGGAGCTAGAGGAAGAATGGGTGATAGAAA
GAGACAGCCTGCTGGATACTCATCCAGATGGAGAAAACAGACCCGAAATCAAAAAGTCAACCACAAGCCA
GAATATTTCTGATGAAAATCAAACCCATGAGATGATAATGGAGAGACTCGCAGGAGACAGCTTCTGGTAC
TCCATCCTAGGAGGACTCTGGGATTTTGATTACCATCCAGAGTTTAACCAAGAAAACCACAAGAGATATT
TAGGACAAGTAACTTTGACCCACAAAAAGATCACACAGGAGAGAAGCCTTGAGTGTAATAAATTTGCAGA
AAACTGTAATCTGAACTCAAACCTTATGCAGCAGAGAATTCCTTCCATTAAAATACCCCTGAATTCTGAC
ACACAGGGAAACAGCATCAAACATAATTCAGACTTGATTTACTATCAGGGAAATTATGTAAGAGAGACTC
CCTATGAATATAGTGAGTGTGGAAAAATCTTCAATCAACATATTCTTCTTACTGATCATATTCATACTGC
AGAGAAACCCAGTGAGTGTGGGAAGGCCTTCAGCCACACCTCATCTCTTAGCCAGCCTCAGATGTTGCTT
ACAGGAGAGAAGCCCTATAAGTGTGATGAATGTGGAAAAAGATTCAGCCAGAGGATACATCTCATTCAAC
ATCAGAGAATTCACACAGGAGAAAAGCCTTTTATATGCAATGGATGTGGGAAAGCCTTCCGTCAGCATTC
ATCCTTTACTCAACATCTGAGGATTCATACTGGAGAAAAGCCCTATAAATGTAATCAATGTGGTAAAGCT
TTTAGCCGCATCACATCCCTTACTGAACATCATAGACTTCATACCGGAGAGAAACCTTACGAATGTGGTT
TCTGTGGCAAAGCCTTCAGTCAGAGGACACATCTGAATCAACATGAAAGAACTCATACAGGAGAGAAACC
CTATAAATGTAATGAATGCGGGAAAGCCTTTAGCCAGAGTGCACACCTTAATCAACACAGGAAAATCCAT
ACTCGGGAGAAATTATGTGAATATAAATGTGAGCAAACTGTTCGCCACAGTCCTTCATTTAGCAGCACAT
AA

Translation (443 aa):
MPSQNAVFSQEGNMEEEEMNDGSQMVRSQESLTFQDVAVDFTREEWDQLYPAQKNLYRDVMLENYRNLVA
LGYQLCKPEVIAQLELEEEWVIERDSLLDTHPDGENRPEIKKSTTSQNISDENQTHEMIMERLAGDSFWY
SILGGLWDFDYHPEFNQENHKRYLGQVTLTHKKITQERSLECNKFAENCNLNSNLMQQRIPSIKIPLNSD
TQGNSIKHNSDLIYYQGNYVRETPYEYSECGKIFNQHILLTDHIHTAEKPSECGKAFSHTSSLSQPQMLL
TGEKPYKCDECGKRFSQRIHLIQHQRIHTGEKPFICNGCGKAFRQHSSFTQHLRIHTGEKPYKCNQCGKA
FSRITSLTEHHRLHTGEKPYECGFCGKAFSQRTHLNQHERTHTGEKPYKCNECGKAFSQSAHLNQHRKIH
TREKLCEYKCEQTVRHSPSFSST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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