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Report for CCDS34833.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34833.1 Public Homo sapiens 8 DEFB106A 24 110 108 CCDS HistoryNCBI Gene:245909Re-query CCDS DB by CCDS ID:34833.1Re-query CCDS DB by GeneID:245909See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34833.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335186.3 ENSP00000335307.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335186.3Link to Ensembl Protein Viewer:ENSP00000335307.2Re-query CCDS DB by Nucleotide ID:ENST00000335186Re-query CCDS DB by Protein ID:ENSP00000335307
Original member Current member NCBI NM_152251.4 NP_689464.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152251.4Link to Protein Sequence:NP_689464.1Re-query CCDS DB by Nucleotide ID:NM_152251Re-query CCDS DB by Protein ID:NP_689464Link to BLAST:NP_689464.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689464.1 65 Q8N104 65 100% 0 0

Chromosomal Locations for CCDS 34833.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 7825177 7825225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 7828805 7828953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (198 nt):
ATGAGGACTTTCCTCTTTCTCTTTGCCGTGCTCTTCTTTCTGACCCCAGCCAAGAATGCATTTTTTGATG
AGAAATGCAACAAACTTAAAGGGACATGCAAGAACAATTGCGGGAAAAATGAAGAACTTATTGCTCTCTG
CCAGAAGTCTCTGAAATGCTGTCGGACCATCCAGCCATGTGGGAGCATTATAGATTAA

Translation (65 aa):
MRTFLFLFAVLFFLTPAKNAFFDEKCNKLKGTCKNNCGKNEELIALCQKSLKCCRTIQPCGSIID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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