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Report for CCDS34896.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34896.1 Public Homo sapiens 8 CHCHD7 24 110 108 CCDS HistoryNCBI Gene:79145Re-query CCDS DB by CCDS ID:34896.1Re-query CCDS DB by GeneID:79145See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34896.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355315.8 ENSP00000347469.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355315.8Link to Ensembl Protein Viewer:ENSP00000347469.3Re-query CCDS DB by Nucleotide ID:ENST00000355315Re-query CCDS DB by Protein ID:ENSP00000347469
Original member Current member NCBI NM_001011671.3 NP_001011671.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001011671.3Link to Protein Sequence:NP_001011671.1Re-query CCDS DB by Nucleotide ID:NM_001011671Re-query CCDS DB by Protein ID:NP_001011671Link to BLAST:NP_001011671.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001011671.1 85 Q9BUK0-1 85 100% 0 0

Chromosomal Locations for CCDS 34896.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 56214614 56214667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56216433 56216531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56217331 56217435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (258 nt):
ATGCCCTCGGTAACACAGAGGCTGAGAGATCCTGACATAAATCCTTGTTTGTCGGAATCTGATGCTTCCA
CCAGATGTCTGGATGAAAATAACTATGACAGGGAAAGGTGTTCCACTTACTTCTTGAGGTACAAAAACTG
CCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA
GCAGAAAGAGATGAAATCTTGAGAGCAGTGGGAAATATGCCCTATTGA

Translation (85 aa):
MPSVTQRLRDPDINPCLSESDASTRCLDENNYDRERCSTYFLRYKNCRRFWNSIVMQRRKNGVKPFMPTA
AERDEILRAVGNMPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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