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Report for CCDS35099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35099.1 Public Homo sapiens 9 PALM2AKAP2 24 110 108 CCDS HistoryNCBI Gene:445815Re-query CCDS DB by CCDS ID:35099.1Re-query CCDS DB by GeneID:445815See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35099.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374531.6 ENSP00000363656.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374531.6Link to Ensembl Protein Viewer:ENSP00000363656.2Re-query CCDS DB by Nucleotide ID:ENST00000374531Re-query CCDS DB by Protein ID:ENSP00000363656
Original member Current member NCBI NM_001037293.3 NP_001032370.1 Accepted alive Link to Nucleotide Sequence:NM_001037293.3Link to Protein Sequence:NP_001032370.1Re-query CCDS DB by Nucleotide ID:NM_001037293Re-query CCDS DB by Protein ID:NP_001032370Link to BLAST:NP_001032370.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032370.1 379 Q9Y2D5-9 379 100% 0 0

Chromosomal Locations for CCDS 35099.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 109640862 109640866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109780488 109780533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109867491 109867571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109880551 109880681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109923735 109923849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109925061 109925082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109942686 109943425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGGAGATGGCAGAGGCGGAATTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAAAAGAAAGAGGCAGA
CTGAAATAGAAGGCAAGCGACAACAGCTTGACGAGCAGATACTTCTGCTGCAGCATTCCAAGTCCAAAGT
GCTTCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTGCCGAAGAGGAGGAAGCCAGGAGGCGG
CAGTCTGAAGAGGATGAGTTCAGAGTCAAGCAACTTGAAGATAACATTCAGAGGCTGGAGCAAGAAATAC
AAACGCTAGAAAGTGAAGAGTCCCAGATATCTGCCAAAGAGCAAATCATCCTAGAGAAACTGAAGGAAAC
AGAAAAATCCTTCAAGGACTTTCAGAAGGGTTTCTCCAGTACGGATGGAGCTGTGTACGCCATGGAAATT
AATGTGGAGAAAGACAAACAAACAGGAGAGACCAAGATTCTCTCTACATCTACCATTGGCCCAGAGGGGG
TCCATCAGAAAGGAGTCAAAGTCTATGATGATGGTACCAAAGTAGTGTATGAGGTGCGCTCAGGAGGCAC
CGTAGTAGAAAATGGAGTGCACAAATTAAGCACAAAGGATGTAGAAGAGCTTATTCAGAAGGCTGGACAA
TCAAGCTTAGGAGGAGGGCACGTGTCTGAAAGGACTGTGATTGCAGATGGGAGCCTCAGCCATCCCAAGG
AACACATGCTCTGCAAAGAAGCTAAGTTAGAAATGGTACATAAGTCTAGGAAAGACCATTCTTCCGGGAA
CCCAGGGCAGCAGGCCCAAGCCCCCAGCGCTGCAGGGCCGGAGGCAAACTTGGATCAGCCCGTCACCATG
ATTTTTATGGGCTACCAAAATATCGAGGATGAAGAGGAGACGAAAAAGGTGCTAGGCTATGATGAAACCA
TCAAGGCTGAATTGGTCCTCATTGATGAAGATGATGAGAAGTCATTGAGGGAGAAGACAGTGACGGACGT
GTCCACTATTGACGGGAACGCGGCTGAGCTTGTGTCCGGGAGGCCGGTCTCAGACACCACAGAGCCCTCA
TCCCCAGAAGGGAAGGAAGAGAGCCTAGCTACAGAGCCAGCCCCAGGTACCCAAAAGAAAAAGCGCTGTC
AATGCTGTGTTGTCATGTGA

Translation (379 aa):
MEMAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTAEEEEARRR
QSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFKDFQKGFSSTDGAVYAMEI
NVEKDKQTGETKILSTSTIGPEGVHQKGVKVYDDGTKVVYEVRSGGTVVENGVHKLSTKDVEELIQKAGQ
SSLGGGHVSERTVIADGSLSHPKEHMLCKEAKLEMVHKSRKDHSSGNPGQQAQAPSAAGPEANLDQPVTM
IFMGYQNIEDEEETKKVLGYDETIKAELVLIDEDDEKSLREKTVTDVSTIDGNAAELVSGRPVSDTTEPS
SPEGKEESLATEPAPGTQKKKRCQCCVVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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