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Report for CCDS35110.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35110.1 Public Homo sapiens 9 WDR31 24 110 108 CCDS HistoryNCBI Gene:114987Re-query CCDS DB by CCDS ID:35110.1Re-query CCDS DB by GeneID:114987See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35110.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374193.9 ENSP00000363308.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374193.9Link to Ensembl Protein Viewer:ENSP00000363308.3Re-query CCDS DB by Nucleotide ID:ENST00000374193Re-query CCDS DB by Protein ID:ENSP00000363308
Original member Current member NCBI NM_001012361.4 NP_001012361.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012361.4Link to Protein Sequence:NP_001012361.1Re-query CCDS DB by Nucleotide ID:NM_001012361Re-query CCDS DB by Protein ID:NP_001012361Link to BLAST:NP_001012361.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012361.1 367 Q8NA23-1 367 100% 0 0

Chromosomal Locations for CCDS 35110.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 113316749 113316909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113318475 113318637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113320357 113320498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113321511 113321578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113322811 113322911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113323011 113323155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113328881 113328955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113330984 113331116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113331907 113332022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGCTGCTACTCAGGTGCCAACTGAAACAAGCTCCTCCACAGAAGGTTTCGTTTAGGTTTTGTGTCGTGA
TGGGGAAACAGCAAAGCAAACTCAAACACAGCACTTATAAATACGGCAGGCCTGATGAAATTATAGAAGA
GAGAATTCAAACTAAAGCTTTTCAAGAGTATAGCCCAGCTCACATGGATACCGTCTCTGTCGTGGCTGCT
TTGAACTCAGACCTTTGTGTCTCTGGAGGGAAAGATAAGACAGTTGTGGCCTATAATTGGAAAACTGGAA
ATGTGGTGAAAAGGTTCAAAGGACATGAACATGAGATCACCAAGGTAGCCTGTATTCCCAAATCCAGCCA
GTTCTTCAGTGCCTCTCGTGACAGGATGGTCATGATGTGGGACTTGCACGGTTCCTCACAACCAAGGCAG
CAATTGTGTGGCCATGCCATGGTGGTCACCGGATTGGCTGTGAGTCCAGACTCATCACAGCTGTGCACTG
GCTCTCGGGACAACACCCTGCTTCTGTGGGATGTGGTGACAGGACAGAGTGTGGAAAGAGCATCTGTCTC
CAGGAACGTGGTCACTCACCTGTGCTGGGTCCCCAGAGAACCATACATACTACAGACCTCTGAAGATAAA
ACCCTCAGATTATGGGACAGTCGGGGGCTGCAGGTAGCTCATATGTTTCCTGCAAAGCAGCACATTCAGA
CCTACTGTGAAGTCAGTGTGGATGGACACAAGTGTATCTCCTGCAGCAATGGCTTTGGAGGAGAAGGCTG
TGAAGCCACGTTGTGGGACCTAAGACAGACTCGAAACAGAATATGTGAGTATAAGGGGCATTTCCAGACT
GTCGCATCCTGCGTCTTTCTACCAAGAGCATTGGCCTTGATGCCTTTAATTGCTACCTCATCACATGATT
GCAAGGTGAAGATTTGGAACCAAGATACTGGAGCCTGCCTTTTCACCTTGTCTCTGGATGGATCAGGACC
CTTGACTTCTCTGGCTGTTGGTGACGCCATCTCCTTATTGTGTGCAAGTTTTAACAGAGGAATTCACTTA
CTCAGAATGGACCACAGCCAAGGGCTGGAACTGCAGGAAGTGGCAGCATTCTGA

Translation (367 aa):
MLLLRCQLKQAPPQKVSFRFCVVMGKQQSKLKHSTYKYGRPDEIIEERIQTKAFQEYSPAHMDTVSVVAA
LNSDLCVSGGKDKTVVAYNWKTGNVVKRFKGHEHEITKVACIPKSSQFFSASRDRMVMMWDLHGSSQPRQ
QLCGHAMVVTGLAVSPDSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTHLCWVPREPYILQTSEDK
TLRLWDSRGLQVAHMFPAKQHIQTYCEVSVDGHKCISCSNGFGGEGCEATLWDLRQTRNRICEYKGHFQT
VASCVFLPRALALMPLIATSSHDCKVKIWNQDTGACLFTLSLDGSGPLTSLAVGDAISLLCASFNRGIHL
LRMDHSQGLELQEVAAF


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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