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Report for CCDS35395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35395.1 Public Homo sapiens X ZDHHC9 24 110 108 CCDS HistoryNCBI Gene:51114Re-query CCDS DB by CCDS ID:35395.1Re-query CCDS DB by GeneID:51114See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35395.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357166.11 ENSP00000349689.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357166.11Link to Ensembl Protein Viewer:ENSP00000349689.6Re-query CCDS DB by Nucleotide ID:ENST00000357166Re-query CCDS DB by Protein ID:ENSP00000349689
Original member Current member EBI ENST00000371064.7 ENSP00000360103.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371064.7Link to Ensembl Protein Viewer:ENSP00000360103.3Re-query CCDS DB by Nucleotide ID:ENST00000371064Re-query CCDS DB by Protein ID:ENSP00000360103
Original member Current member NCBI NM_001008222.3 NP_001008223.1 Accepted alive Link to Nucleotide Sequence:NM_001008222.3Link to Protein Sequence:NP_001008223.1Re-query CCDS DB by Nucleotide ID:NM_001008222Re-query CCDS DB by Protein ID:NP_001008223Link to BLAST:NP_001008223.1
Original member Current member NCBI NM_016032.4 NP_057116.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016032.4Link to Protein Sequence:NP_057116.2Re-query CCDS DB by Nucleotide ID:NM_016032Re-query CCDS DB by Protein ID:NP_057116Link to BLAST:NP_057116.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008223.1 364 Q9Y397 364 100% 0 0
NP_057116.2 364 Q9Y397 364 100% 0 0

Chromosomal Locations for CCDS 35395.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 129806370 129806486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129810905 129811001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129811406 129811509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129812718 129812820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129813677 129813725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129814658 129814795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129823679 129823837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129828981 129829141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129841779 129841945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGTCTGTGATGGTGGTGAGAAAGAAGGTGACACGGAAATGGGAGAAACTCCCAGGCAGGAACACCTTTT
GCTGTGATGGCCGCGTCATGATGGCCCGGCAAAAGGGCATTTTCTACCTGACCCTTTTCCTCATCCTGGG
GACATGTACACTCTTCTTCGCCTTTGAGTGCCGCTACCTGGCTGTTCAGCTGTCTCCTGCCATCCCTGTA
TTTGCTGCCATGCTCTTCCTTTTCTCCATGGCTACACTGTTGAGGACCAGCTTCAGTGACCCTGGAGTGA
TTCCTCGGGCGCTACCAGATGAAGCAGCTTTCATAGAAATGGAGATAGAAGCTACCAATGGTGCGGTGCC
CCAGGGCCAGCGACCACCGCCTCGTATCAAGAATTTCCAGATAAACAACCAGATTGTGAAACTGAAATAC
TGTTACACATGCAAGATCTTCCGGCCTCCCCGGGCCTCCCATTGCAGCATCTGTGACAACTGTGTGGAGC
GCTTCGACCATCACTGCCCCTGGGTGGGGAATTGTGTTGGAAAGAGGAACTACCGCTACTTCTACCTCTT
CATCCTTTCTCTCTCCCTCCTCACAATCTATGTCTTCGCCTTCAACATCGTCTATGTGGCCCTCAAATCT
TTGAAAATTGGCTTCTTGGAGACATTGAAAGAAACTCCTGGAACTGTTCTAGAAGTCCTCATTTGCTTCT
TTACACTCTGGTCCGTCGTGGGACTGACTGGATTTCATACTTTCCTCGTGGCTCTCAACCAGACAACCAA
TGAAGACATCAAAGGATCATGGACAGGGAAGAATCGCGTCCAGAATCCCTACAGCCATGGCAATATTGTG
AAGAACTGCTGTGAAGTGCTGTGTGGCCCCTTGCCCCCCAGTGTGCTGGATCGAAGGGGTATTTTGCCAC
TGGAGGAAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGAGCCCAGC
CCCCACAGAACACCTGAACTCAAATGAGATGCCGGAGGACAGCAGCACTCCCGAAGAGATGCCACCTCCA
GAGCCCCCAGAGCCACCACAGGAGGCAGCTGAAGCTGAGAAGTAG

Translation (364 aa):
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQLSPAIPV
FAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKY
CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYVALKS
LKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIV
KNCCEVLCGPLPPSVLDRRGILPLEESGSRPPSTQETSSSLLPQSPAPTEHLNSNEMPEDSSTPEEMPPP
EPPEPPQEAAEAEK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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