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Report for CCDS3736.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
3736.1 |
Public |
Homo sapiens |
4 |
MFSD8 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:256471](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:3736.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:256471](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 3736.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000296468.8 |
ENSP00000296468.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000296468.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000296468.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000296468](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000296468](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000641686.2 |
ENSP00000493218.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000641686.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000493218.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000641686](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000493218](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000641434.1 |
ENSP00000493279.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000641434.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000493279.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000641434](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000493279](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000641748.1 |
ENSP00000493330.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000641748.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000493330.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000641748](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000493330](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001371596.2 |
NP_001358525.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001371596.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001358525.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001371596](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001358525](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001358525.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_152778.4 |
NP_689991.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_152778.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_689991.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_152778](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_689991](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_689991.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 3736.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1557 nt): ATGGCCGGCCTGCGGAACGAAAGTGAACAGGAGCCGCTCTTAGGCGACACACCTGGAAGCAGAGAATGGG ACATTTTAGAGACTGAAGAGCATTATAAGAGCCGATGGAGATCTATTAGGATTTTATATCTTACTATGTT TCTCAGCAGTGTAGGGTTTTCTGTAGTGATGATGTCCATATGGCCATATCTCCAAAAGATTGATCCGACA GCTGATACAAGTTTTTTGGGCTGGGTTATTGCTTCATATAGTCTTGGCCAAATGGTAGCTTCACCTATAT TTGGTTTATGGTCTAATTATAGACCAAGAAAAGAGCCTCTTATTGTCTCCATCTTGATTTCCGTGGCAGC CAACTGCCTCTATGCATATCTCCACATCCCAGCTTCTCATAATAAATACTACATGCTGGTTGCTCGTGGA TTGTTGGGAATTGGAGCAGGAAATGTAGCAGTTGTTAGATCATATACTGCTGGTGCTACTTCCCTTCAGG AAAGAACAAGTTCCATGGCAAACATAAGCATGTGTCAAGCATTAGGTTTTATTCTAGGTCCAGTTTTTCA GACTTGTTTTACATTCCTTGGAGAAAAAGGTGTGACATGGGATGTGATTAAACTGCAGATAAACATGTAT ACAACACCAGTTTTACTTAGCGCCTTCCTGGGAATTTTAAATATTATTCTGATCCTTGCCATACTAAGAG AACATCGTGTGGATGACTCAGGAAGACAGTGTAAAAGTATTAATTTTGAAGAAGCAAGTACAGATGAAGC TCAGGTTCCCCAAGGAAATATTGACCAGGTTGCTGTTGTGGCCATCAATGTTCTGTTTTTTGTGACTCTA TTTATCTTTGCCCTTTTTGAAACCATCATTACTCCATTAACAATGGATATGTATGCCTGGACTCAAGAAC AAGCTGTGTTATATAATGGCATAATACTTGCTGCTCTTGGGGTTGAAGCCGTTGTTATTTTCTTAGGAGT TAAGTTGCTTTCCAAAAAGATTGGCGAGCGTGCTATTCTACTGGGAGGACTCATCGTTGTATGGGTTGGC TTCTTTATCTTGTTACCTTGGGGAAATCAATTTCCCAAAATACAGTGGGAAGATTTGCACAATAATTCAA TCCCTAATACCACATTTGGGGAAATTATTATTGGTCTTTGGAAGTCTCCAATGGAAGATGACAATGAAAG ACCAACTGGTTGCTCGATTGAACAAGCCTGGTGCCTCTACACCCCGGTGATTCATCTGGCCCAGTTCCTT ACATCAGCTGTGCTAATAGGATTAGGCTATCCAGTCTGCAATCTTATGTCCTATACTCTATATTCAAAAA TTCTAGGACCAAAACCTCAGGGTGTATACATGGGCTGGTTAACAGCATCTGGAAGTGGAGCCCGGATTCT TGGGCCTATGTTCATCAGCCAAGTGTATGCTCACTGGGGACCACGATGGGCATTCAGCCTGGTGTGTGGA ATAATAGTGCTCACCATCACCCTCCTGGGAGTGGTTTACAAAAGACTCATTGCTCTTTCTGTAAGATATG GGAGGATTCAGGAATAA
Translation (518 aa): MAGLRNESEQEPLLGDTPGSREWDILETEEHYKSRWRSIRILYLTMFLSSVGFSVVMMSIWPYLQKIDPT ADTSFLGWVIASYSLGQMVASPIFGLWSNYRPRKEPLIVSILISVAANCLYAYLHIPASHNKYYMLVARG LLGIGAGNVAVVRSYTAGATSLQERTSSMANISMCQALGFILGPVFQTCFTFLGEKGVTWDVIKLQINMY TTPVLLSAFLGILNIILILAILREHRVDDSGRQCKSINFEEASTDEAQVPQGNIDQVAVVAINVLFFVTL FIFALFETIITPLTMDMYAWTQEQAVLYNGIILAALGVEAVVIFLGVKLLSKKIGERAILLGGLIVVWVG FFILLPWGNQFPKIQWEDLHNNSIPNTTFGEIIIGLWKSPMEDDNERPTGCSIEQAWCLYTPVIHLAQFL TSAVLIGLGYPVCNLMSYTLYSKILGPKPQGVYMGWLTASGSGARILGPMFISQVYAHWGPRWAFSLVCG IIVLTITLLGVVYKRLIALSVRYGRIQE
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