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Report for CCDS37428.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37428.1 Public Mus musculus 17 Ezr 23 108 98 CCDS HistoryNCBI Gene:22350Re-query CCDS DB by CCDS ID:37428.1Re-query CCDS DB by GeneID:22350See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37428.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064234.6 ENSMUSP00000063734.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064234.6Link to Ensembl Protein Viewer:ENSMUSP00000063734.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000064234Re-query CCDS DB by Protein ID:ENSMUSP00000063734
Original member Current member NCBI NM_009510.2 NP_033536.2 Accepted alive Link to Nucleotide Sequence:NM_009510.2Link to Protein Sequence:NP_033536.2Re-query CCDS DB by Nucleotide ID:NM_009510Re-query CCDS DB by Protein ID:NP_033536Link to BLAST:NP_033536.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033536.2 586 P26040 586 100% 0 0

Chromosomal Locations for CCDS 37428.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 6739303 6739467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6739630 6739881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6740963 6741055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6741421 6741581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6742354 6742484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6742690 6742853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6747264 6747360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6752983 6753129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6753986 6754069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6754611 6754885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6755848 6755943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6759479 6759562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6782632 6782643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGCCCAAGCCAATCAACGTCCGGGTGACCACCATGGATGCCGAGCTGGAGTTTGCCATCCAGCCAAACA
CCACCGGGAAGCAGCTCTTTGATCAGGTGGTAAAGACGATTGGCCTCCGGGAAGTGTGGTACTTCGGCCT
CCAGTATGTAGACAATAAAGGATTTCCTACCTGGCTGAAACTTGATAAAAAGGTCTCCGCACAGGAGGTC
CGAAAGGAGAACCCTGTCCAGTTTAAATTCCGGGCCAAGTTCTACCCCGAAGACGTGGCCGAGGAACTCA
TCCAGGACATCACACAGAAGCTCTTCTTCCTGCAAGTCAAGGACGGGATCCTCAGCGACGAGATCTACTG
CCCCCCAGAGACAGCCGTGCTCCTGGGCTCCTATGCCGTTCAGGCCAAGTTCGGAGATTATAACAAGGAA
ATGCACAAGTCTGGGTACCTCAGCTCGGAGCGGCTGATCCCCCAGAGAGTCATGGACCAACACAAGCTCA
GCAGGGACCAGTGGGAGGACCGGATCCAGGTGTGGCACGCGGAACACCGAGGGATGCTCAAGGACAGTGC
TATGCTAGAATACCTGAAGATTGCCCAGGACCTGGAAATGTATGGGATCAACTATTTCGAGATCAAAAAC
AAGAAAGGAACAGACCTTTGGCTTGGAGTCGATGCCCTTGGACTTAACATTTATGAGAAAGATGACAAGT
TGACCCCAAAGATCGGCTTCCCTTGGAGTGAGATCAGGAACATCTCTTTCAACGACAAGAAGTTTGTCAT
TAAGCCCATCGACAAGAAGGCACCTGACTTTGTGTTCTACGCCCCGCGCCTGAGAATTAACAAGCGGATC
CTGCAGCTCTGCATGGGGAACCATGAGCTGTACATGCGCCGCAGGAAGCCCGACACCATCGAGGTGCAGC
AGATGAAGGCCCAGGCTCGGGAGGAGAAGCACCAGAAGCAGCTAGAGCGACAGCAGTTGGAAACCGAGAA
GAAGAGGCGAGAGACGGTGGAGAGAGAAAAGGAGCAGATGCTCCGGGAGAAGGAGGAGCTGATGCTTCGG
CTGCAGGACTACGAGCAGAAGACCAAGAGGGCGGAGAAAGAGCTCTCCGAGCAGATTGAGAAGGCCCTCC
AACTGGAGGAAGAGAGGAGGCGAGCCCAGGAGGAGGCTGAACGTCTGGAGGCCGACCGCATGGCCGCCCT
GCGGGCCAAGGAAGAACTCGAGAGACAGGCGCAGGATCAGATAAAGAGCCAGGAGCAGCTGGCTGCAGAG
CTGGCAGAGTACACGGCCAAGATCGCACTGCTGGAGGAGGCGCGGAGGCGCAAGGAGGACGAGGTAGAAG
AGTGGCAGCACCGGGCTAAAGAAGCCCAGGACGACCTGGTGAAGACCAAAGAGGAGCTGCACCTGGTGAT
GACGGCCCCACCGCCCCCACCGCCCCCAGTGTATGAGCCTGTGAATTACCACGTGCAGGAGGGACTGCAG
GACGAGGGAGCAGAGCCTATGGGCTACAGTGCCGAGCTCTCCAGTGAGGGCATCCTGGATGACCGCAACG
AGGAGAAGCGGATCACAGAGGCAGAGAAGAATGAGCGCGTGCAGCGGCAGCTGCTGACCCTGAGCAATGA
GTTGTCCCAGGCCCGGGATGAGAACAAGAGGACCCACAATGACATCATCCACAACGAGAACATGCGGCAA
GGCAGGGACAAGTATAAGACGCTGCGGCAAATCAGGCAGGGCAACACCAAGCAACGCATTGACGAGTTCG
AGGCCATGTAG

Translation (586 aa):
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLQYVDNKGFPTWLKLDKKVSAQEV
RKENPVQFKFRAKFYPEDVAEELIQDITQKLFFLQVKDGILSDEIYCPPETAVLLGSYAVQAKFGDYNKE
MHKSGYLSSERLIPQRVMDQHKLSRDQWEDRIQVWHAEHRGMLKDSAMLEYLKIAQDLEMYGINYFEIKN
KKGTDLWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRI
LQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMLREKEELMLR
LQDYEQKTKRAEKELSEQIEKALQLEEERRRAQEEAERLEADRMAALRAKEELERQAQDQIKSQEQLAAE
LAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDLVKTKEELHLVMTAPPPPPPPVYEPVNYHVQEGLQ
DEGAEPMGYSAELSSEGILDDRNEEKRITEAEKNERVQRQLLTLSNELSQARDENKRTHNDIIHNENMRQ
GRDKYKTLRQIRQGNTKQRIDEFEAM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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