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Report for CCDS37622.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37622.1 Public Mus musculus 17 Adgrf5 23 108 98 CCDS HistoryNCBI Gene:224792Re-query CCDS DB by CCDS ID:37622.1Re-query CCDS DB by GeneID:224792See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37622.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113599.1 ENSMUSP00000109229.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113599.1Link to Ensembl Protein Viewer:ENSMUSP00000109229.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113599Re-query CCDS DB by Protein ID:ENSMUSP00000109229
Original member Current member EBI ENSMUST00000226087.1 ENSMUSP00000153049.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000226087.1Link to Ensembl Protein Viewer:ENSMUSP00000153049.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000226087Re-query CCDS DB by Protein ID:ENSMUSP00000153049
Original member NCBI NM_001081178.1 NP_001074647.1 Updated not alive Link to Nucleotide Sequence:NM_001081178.1Link to Protein Sequence:NP_001074647.1Re-query CCDS DB by Nucleotide ID:NM_001081178Re-query CCDS DB by Protein ID:NP_001074647
Current member NCBI NM_001081178.2 NP_001074647.1 Accepted alive Link to Nucleotide Sequence:NM_001081178.2Link to Protein Sequence:NP_001074647.1Re-query CCDS DB by Nucleotide ID:NM_001081178Re-query CCDS DB by Protein ID:NP_001074647Link to BLAST:NP_001074647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074647.1 1348 G5E8Q8 1348 100% 0 0

Chromosomal Locations for CCDS 37622.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 43403942 43404043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43410502 43410556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43422498 43422656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43424415 43424591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43424714 43424823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43426285 43426343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43426939 43427084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43428445 43428666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43430504 43430707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43437516 43437686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43439951 43440160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43441784 43442002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43444987 43445139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43446004 43446212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43446873 43447052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43449792 43451195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43452280 43452321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43452416 43452475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43453071 43453155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43455256 43455335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4047 nt):
ATGAGATCGCCAAGGACCTTCACGTTCTACTTCCTGCTTCTTGTGATTTGTTCTTCAGAAGCTGCGCTGA
GCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCAAGAACATGAGCTAGCCGGGGAAGAGCTACT
GAGGCCAAAAAGAGCAGCTGCAGCGGGTGATCGCGTGGCGGAAGAATACATGGTGGATATTGAGATCAGC
TTTGAAAATGTCTCCTTCCTGGAGTCCATCAGAGCTCACTTGAACAACCTCAGTTTTCCAATTCGAGGGA
CCGAAGCTGACATTTTGAACATAGCAATGACTACAGTCTGCACTCCTGCTGGAAATGACCTCTTGTGCTT
CTGTGAGAAAGGCTACCAGTGGTCTGAGGAAAGGTGTCTCCACTCTCTCACTTGTCAAGACTATGACAGT
GCCCTGCCAGGCGGCTACTGCAGTTGTCTGAAAGGACTTCCTCCCCAGGGACCTTTCTGCCAGCTCCCAG
AAGCATTCATTACCTTAAAACTCAAAGTCAGACTGAACATAGGATTTCAAGAAGACCTAAAGAACACGTC
TTCTGCCCTCTATAGGTCCTACAAGACTGATCTGGAAAGAGCGTTCCGAGCGGGTTACAGAACTTTACCA
GGATTCAGATCGGTGACTGTGACACAGTTCACCAAGGGCAGCGTGGTTGTGAACTACGTAGTCCGGGTTA
CATCGGCACCACTGCCTGGATCTATTCATAAAGCCAATGAACAAGTCATACAGAACCTCAACCATACTTA
CAAAATGGACTACAACTCCTTCCAGGGAACCCCGAGCAATGAGACGAAATTCACTGTCATACCAGAATTC
ATCTTTGAGGGAGACAATGTGACTCTGGAGTGTGAAACTGAGTTCGTGACCTCCAACACGTCTTGGTACT
ATGGAGAAAAACGCTCTGACATCCAGAACAGCGACAAATACTCCATTCACACCACTGTCATCAACAATAT
AAGCCTGATCACCCGCCTTACCATTTACAACTTCACACAGCATGATGCGGGCATGTATGGTTGCAATGTG
ACATTGGATATTTTTGAATATGGAACAGTCAGAAAATTAGATGTCACTCCCATCCGGATTTTGGCCAAGG
AGGAGAGAAAGGTGGTGTGTGACAACCATCCTATATCGCTGAACTGCTGCAGCGAGAATATTGCAAACTG
GAGCAGTATTGAATGGAAACAGGAAGGGAAGATAAGCATTCTAGGGAACCCAGAATCAGACCTAGAGTCT
AGCTGCAGCACTTACACGCTCAAGGCAGATGGAACCCAGTGTCCCAGTGGGTCTTCTGGAACAACAGTCA
TCTACACATGCGAGTTCGTCAGTGCCTATGGAGCCAGAGGCAGTAAGAACATAGCTGTGACCTTCACCTC
TGTAGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGAGGGACAAAGCTTTTCTATAACCTGC
CTCAGCGATGTGAGTAGCTTTGATGAGGTGTACTGGAACACCTCAGCTGGTATTAAAATCCACCCAAGGT
TTTATACCATGAGGAGGTATCAGGATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACCCGAGAGTG
GAACGGAACCTACCACTGCATATTTAGATATAAGAATTCATACAGCATTGCCACCAAAGATGTCACCGTT
CACCCGCTGCCTCTGGTGTCAGACATCATGATGGATCCTTTGGAAGCCAGTGGTCTGTGTACCAGTTCCC
ATCAATTCAAATGCTGCGTAGAAGAGGATGCAGGGGAAGAGTACGCTGTGACTTTCCACGTGGACTCCTC
ATCCTTTCCCGCTGAAAGAGAAGTTATCGGCAAGCAAGCATGCTACACATACAGTCTCCCAGCGAACTTA
CCTCGATGTCCCAAAGACATCGCAGTGTTCTGCCACTTCACCAATGCAGCCAACAGCTCAGTCCGGAGCC
CATCTATGAAGCTCAAACTTATTCCAAGGGAGAATGTCACATGCCAGGATCCCATCATTGGCATTGGGGA
TCCTGGGAAAGTCATTCAGAAGCTGTGCCAGTTCTCAGGTGTTTACGGAAGCCCTGGACAGGCCATCGGC
GGGACTGTCACTTACAAATGTGTGGGCACCCAGTGGAAGGAGGAGTCAAGGGCCTGCATCTCAGCTCCAA
TCAATGGTTTGCTCCAGGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGACCAGAAGCTCCCTACATA
CCTGAGGGACCTTTCTGTTAGTGCTGGGAAGGAAGAACAGGACATCCGCTCATCTCCAGGAAGCCTGGGA
GCCATCATCAGCATCCTTGACTTGCTCTCAACGGTTCCCACCCAAGTGAATTCAGAAATGATGAGAGACA
TACTTGCTACCATTAACGTCATCTTAGACAAGTCTGCCTTGAACTCCTGGGAGAAGTTGCTACAGCAACA
GAGCAATCAGAGTTCTCAGTTCCTGCACTCCGTGGAAAGGTTTTCCCAAGCCCTCCAGCTGGGAGACAGC
ACTCCTCCATTCCTCGCCCACCCTAACGTTCAGATGAAGAGCATGGTGATAAAACGTGGCCACCCCCAAA
TCTACCAACAGCAGTTTATCTTCAAAGACTCTGACCTGTGGGGTGATGTAGCCATTGATGAGTGTCAGCT
GGGAAACTTGCAGCCTGATTCATCGATCGTTACTGTGGCTTTCCCAACTCTCAAAGCCATCCTTGCCCAG
GATGTACAGAGAAAGACATCCTCCAACAGCTTAGTAATGACAACCACTGTCAGCCATAACATTGTCAAGC
CATTTAGGATTTCTATGACTTTTAAGAACAACCATCGTTCGGGTGGCAAGCCACAGTGTGTCTTCTGGAA
CTTCAGTCTTGCCAACAATACAGGGGGCTGGGACAGCAGTGGGTGCTCTGTGGAAGATGATGGTAGGGAC
AATAGGGACAGAGTCTTCTGCAAGTGTAACCACCTGACGTCATTCTCCATCCTCATGTCCCCAGACTCCC
CAGATCCAGGGTCTCTTTTAAAAATACTTCTGGATATCATTTCTTACATCGGGTTGGGGTTTTCCATAGT
CAGCTTAGCTGCCTGTCTAGTTGTGGAAGCCATGGTGTGGAAATCTGTGACCAAGAACCGAACTTCCTAT
ATGCGCCACATCTGCATAGTCAACATTGCCTTTTGCCTTCTGATTGCTGACATCTGGTTCATTGTGGCTG
GTGCTATCCACGACGGTCGCTACCCACTCAACGAAACAGCCTGTGTGGCCGCCACATTCTTCATTCACTT
CTTCTACCTCAGTGTCTTCTTCTGGATGCTAACTCTAGGCCTCATGCTCTTCTACCGGCTGATTTTCATT
CTACACGATGCAAGCAAGTCCACTCAGAAAGCCATCGCATTTTCTCTAGGCTATGGCTGTCCCCTCATTA
TCTCCTCTATCACAGTGGGGGTTACGCAGCCACAGGAAGTCTACATGAGGAAGAACGCGTGTTGGCTCAA
CTGGGAGGACACCAGAGCACTGCTGGCTTTTGCCATCCCCGCGTTGATTATTGTGGTGGTAAATGTGAGC
ATCACAGTTGTGGTCATCACCAAGATCCTGAGGCCCTCCATTGGGGACAAGCCAGGCAAGCAAGAGAAGA
GCAGCCTATTCCAGATCAGCAAGAGTATCGGGGTCCTCACACCACTCTTGGGGCTCACTTGGGGTTTCGG
TCTTGCCACAGTGATCCAGGGAAGCAATGCTGTGTTCCACATCATATTTACTCTCCTCAATGCCTTCCAG
GGGCTCTTCATTTTGCTCTTTGGCTGCCTCTGGGATCAGAAGGTGCAGGAAGCTTTGCTGCATAAGTTTT
CATTGTCAAGGTGGTCTTCTCAACACTCAAAGTCAACATCCATAGGTTCGTCAACACCCGTGTTTTCAAT
GAGTTCTCCAATATCCCGAAGATTTAATAATCTTTTTGGTAAAACAGGAACATATAACGTTTCCACCCCA
GAGACAACCAGTTCATCCCTGGAAAATTCCTCTAGTGCTTACTCACTGCTCAACTAG

Translation (1348 aa):
MRSPRTFTFYFLLLVICSSEAALSTPTEPIVQPSILQEHELAGEELLRPKRAAAAGDRVAEEYMVDIEIS
FENVSFLESIRAHLNNLSFPIRGTEADILNIAMTTVCTPAGNDLLCFCEKGYQWSEERCLHSLTCQDYDS
ALPGGYCSCLKGLPPQGPFCQLPEAFITLKLKVRLNIGFQEDLKNTSSALYRSYKTDLERAFRAGYRTLP
GFRSVTVTQFTKGSVVVNYVVRVTSAPLPGSIHKANEQVIQNLNHTYKMDYNSFQGTPSNETKFTVIPEF
IFEGDNVTLECETEFVTSNTSWYYGEKRSDIQNSDKYSIHTTVINNISLITRLTIYNFTQHDAGMYGCNV
TLDIFEYGTVRKLDVTPIRILAKEERKVVCDNHPISLNCCSENIANWSSIEWKQEGKISILGNPESDLES
SCSTYTLKADGTQCPSGSSGTTVIYTCEFVSAYGARGSKNIAVTFTSVANLTITRDPISVSEGQSFSITC
LSDVSSFDEVYWNTSAGIKIHPRFYTMRRYQDGAESVLMVKTSTREWNGTYHCIFRYKNSYSIATKDVTV
HPLPLVSDIMMDPLEASGLCTSSHQFKCCVEEDAGEEYAVTFHVDSSSFPAEREVIGKQACYTYSLPANL
PRCPKDIAVFCHFTNAANSSVRSPSMKLKLIPRENVTCQDPIIGIGDPGKVIQKLCQFSGVYGSPGQAIG
GTVTYKCVGTQWKEESRACISAPINGLLQVAKALIKSPTQDQKLPTYLRDLSVSAGKEEQDIRSSPGSLG
AIISILDLLSTVPTQVNSEMMRDILATINVILDKSALNSWEKLLQQQSNQSSQFLHSVERFSQALQLGDS
TPPFLAHPNVQMKSMVIKRGHPQIYQQQFIFKDSDLWGDVAIDECQLGNLQPDSSIVTVAFPTLKAILAQ
DVQRKTSSNSLVMTTTVSHNIVKPFRISMTFKNNHRSGGKPQCVFWNFSLANNTGGWDSSGCSVEDDGRD
NRDRVFCKCNHLTSFSILMSPDSPDPGSLLKILLDIISYIGLGFSIVSLAACLVVEAMVWKSVTKNRTSY
MRHICIVNIAFCLLIADIWFIVAGAIHDGRYPLNETACVAATFFIHFFYLSVFFWMLTLGLMLFYRLIFI
LHDASKSTQKAIAFSLGYGCPLIISSITVGVTQPQEVYMRKNACWLNWEDTRALLAFAIPALIIVVVNVS
ITVVVITKILRPSIGDKPGKQEKSSLFQISKSIGVLTPLLGLTWGFGLATVIQGSNAVFHIIFTLLNAFQ
GLFILLFGCLWDQKVQEALLHKFSLSRWSSQHSKSTSIGSSTPVFSMSSPISRRFNNLFGKTGTYNVSTP
ETTSSSLENSSSAYSLLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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