NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS3783.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3783.2 Public Homo sapiens 4 TMEM131L 24 110 108 CCDS HistoryNCBI Gene:23240Re-query CCDS DB by CCDS ID:3783.2Re-query CCDS DB by GeneID:23240See the combined annotation on chromosome 4 in Sequence Viewer

Public Note for CCDS 3783.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and homology data, and to include an alternative splice acceptor site at exon 12 based on the splice pattern of BC131505.1, which is the longest transcript available for this locus. The majority of human transcripts, including AK092270.1 and BC044932.1, include an extra 3 nts in exon 12 due to alternative splicing, and would encode an additional alanine residue at position 354 of the protein, but all of these transcripts are partial.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3783.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409663.7 ENSP00000386574.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409663.7Link to Ensembl Protein Viewer:ENSP00000386574.3Re-query CCDS DB by Nucleotide ID:ENST00000409663Re-query CCDS DB by Protein ID:ENSP00000386574
Original member Current member NCBI NM_015196.4 NP_056011.3 Accepted alive Link to Nucleotide Sequence:NM_015196.4Link to Protein Sequence:NP_056011.3Re-query CCDS DB by Nucleotide ID:NM_015196Re-query CCDS DB by Protein ID:NP_056011Link to BLAST:NP_056011.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056011.3 1609 A2VDJ0-1 1609 100% 0 0

Chromosomal Locations for CCDS 3783.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 153466398 153466521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153467211 153467281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153473845 153473888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153550073 153550141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153555787 153555910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153556966 153557082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153558258 153558368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153580826 153580903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153581407 153581560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153583190 153583248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153583564 153583672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153584838 153584931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153585458 153585611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153586209 153586379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153587742 153587811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153588890 153589007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153591053 153591194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153592475 153592584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153593799 153593871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153596258 153596385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153598590 153598732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153602152 153602338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153602542 153602727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153603303 153603452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153603802 153604430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153612252 153612400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153620756 153620880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153621683 153621849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153622898 153623083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153626147 153626225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153627605 153627687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153632718 153632838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153634192 153634280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153635432 153635571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153636301 153636576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4830 nt):
ATGGCGGGGCTCCGACGCCCGCAGCCCGGCTGCTACTGCCGCACCGCGGCGGCCGTGAACCTCCTGCTGG
GCGTCTTCCAGGTCCTGCTGCCCTGCTGTCGCCCGGGAGGGGCTCAGGGACAAGCGATTGAGCCGTTGCC
GAACGTGGTGGAGCTGTGGCAGGCAGAAGAAGGGGAACTCCTGCTGCCCACTCAGGGTGATTCTGAAGAG
GGTCTGGAGGAGCCTTCTCAAGAACAGAGCTTCTCGGACAAACTATTTAGTGGAAAAGGCTTACATTTTC
AGCCATCAGTTTTAGATTTTGGAATACAGTTCCTGGGACATCCTGTAGCAAAGATTCTCCATGCTTACAA
CCCTAGTAGGGACAGCGAGGTTGTGGTGAATTCAGTGTTTGCAGCTGCTGGACATTTCCATGTACCGCCA
GTTCCCTGCAGGGTAATTCCAGCAATGGGGAAAACTTCCTTCAGAATTATTTTCTTACCTACTGAAGAAG
GAAGCATTGAAAGTTCCTTATTTATTAATACCTCTTCGTATGGAGTCCTTTCCTATCATGTATCTGGAAT
TGGCACTCGTAGAATCTCTACAGAAGGGTCTGCAAAGCAGCTACCAAATGCTTATTTTCTGCTTCCAAAG
GTCCAGAGCATTCAGCTGTCTCAAATGCAGGCAGAAACCACTAATACTAGCCTCTTGCAGGTGCAACTGG
AATGCAGTTTACATAATAAAGTGTGTCAGCAATTAAAGGGTTGTTATCTGGAATCTGATGATGTTTTGCG
TCTACAAATGAGCATAATGGTAACAATGGAAAACTTTTCAAAAGAATTTGAAGAAAACACACAACATTTG
TTAGATCATCTCTCTATTGTTTACGTAGCTACAGATGAATCTGAGACCTCAGATGATTCAGCAGTAAATA
TGTATATATTACATTCAGGAAACAGCCTTATATGGATACAGGATATACGCCATTTCTCACAGAGAGATGC
TCTGTCTCTGCAGTTTGAACCAGTACTACTACCTACTTCTACAACAAACTTTACAAAAATTGCTTCTTTT
ACCTGCAAAGCTACATCATGTGACAGTGGAATTATAGAAGATGTGAAGAAAACAACACACACTCCAACAC
TAAAAGCATGCCTCTTCTCTTCTGTGGCTCAGGGGTATTTTAGAATGGACTCTTCTGCAACCCAGTTTCA
CATAGAGACTCATGAGAACACATCAGGACTTTGGTCAATATGGTACCGCAACCATTTTGACCGTAGTGTT
GTATTAAATGATGTGTTTCTTTCCAAGGAGACCAAGCACATGTTAAAGATTCTGAATTTCACTGGCCCTT
TATTTCTACCTCCAGGCTGTTGGAATATATTTTCTTTGAAACTTGCTGTTAAAGACATTGCCATAAATCT
ATTCACCAATGTATTTTTGACTACAAACATAGGTGCCATTTTTGCAATACCTCTACAGATTTATTCAGCA
CCAACCAAGGAAGGGAGTCTGGGTTTTGAAGTGATAGCACATTGTGGCATGCATTATTTCATGGGAAAAT
CAAAAGCAGGAAATCCTAATTGGAATGGGAGCCTTTCTCTGGATCAATCTACCTGGAATGTGGATTCTGA
ACTTGCAAATAAATTGTATGAAAGATGGAAGAAATATAAAAATGGTGACGTCTGCAAGAGGAATGTTTTG
GGAACAACTCGATTTGCTCACTTGAAGAAATCCAAGGAGTCAGAGTCCTTTGTTTTCTTTTTGCCTCGTT
TGATCGCAGAGCCTGGCCTCATGTTAAACTTCAGCGCAACTGCCCTTAGGAGCAGGATGATCAAGTACTT
TGTGGTGCAGAACCCGTCCTCTTGGCCGGTCTCCTTGCAGCTCCTGCCTCTCTCCTTGTACCCTAAACCC
GAAGCCCTAGTGCACCTGCTCCACAGATGGTTTGGCACTGATATGCAGATGATTAATTTCACAACTGGTG
AATTCCAGCTCACCGAAGCTTGCCCTTACCTGGGTACGCATTCTGAGGAATCCAGGTTTGGCATCCTCCA
CTTACATCTGCAGCCTTTGGAAATGAAAAGGGTTGGCGTAGTTTTCACACCTGCTGACTATGGAAAAGTT
ACCTCACTCATACTAATCCGGAATAACTTGACTGTTATTGACATGATTGGCGTGGAAGGATTTGGAGCAA
GAGAGTTATTAAAAGTGGGTGGAAGACTTCCTGGTGCAGGAGGCTCACTCCGATTTAAGGTGCCCGAGTC
CACGCTGATGGACTGCCGTAGACAACTGAAAGACAGTAAGCAAATTTTATCTATTACAAAGAACTTTAAA
GTTGAGAATATTGGACCTCTTCCTATAACTGTTTCGTCTCTGAAAATTAATGGGTATAACTGCCAAGGTT
ATGGATTCGAGGTGCTGGATTGTCATCAGTTTTCCCTGGACCCAAACACATCCCGCGATATCAGCATTGT
GTTCACTCCAGACTTTACCTCCTCCTGGGTAATTCGGGACCTAAGTCTTGTAACCGCAGCGGACCTAGAA
TTTCGCTTCACTCTCAATGTGACTCTCCCTCATCACCTGTTGCCCTTGTGTGCAGACGTGGTTCCAGGAC
CCAGCTGGGAGGAGTCATTTTGGAGGCTCACGGTCTTCTTTGTCAGTTTGTCCCTGTTGGGTGTGATTTT
AATAGCCTTCCAACAAGCACAGTACATTCTCATGGAATTCATGAAAACAAGACAGAGGCAAAATGCTAGC
TCCTCTTCACAGCAAAACAATGGTCCTATGGATGTAATCAGCCCCCATTCTTACAAAAGCAATTGCAAGA
ACTTTCTCGATACATATGGCCCCTCTGATAAAGGCAGGGGGAAGAACTGCCTTCCAGTGAACACTCCCCA
AAGCAGGATCCAGAATGCTGCAAAGAGGAGCCCAGCCACCTATGGTCATTCTCAGAAGAAGCACAAATGC
TCAGTGTATTACAGTAAACACAAAACCAGCACAGCTGCGGCCAGCAGCACCAGCACGACTACTGAGGAAA
AACAGACTTCACCCCTGGGCAGCTCACTGCCTGCTGCTAAAGAGGACATTTGCACTGATGCCATGCGTGA
GAACTGGATCAGCCTCAGATATGCAAGTGGCATAAATGTCAACCTGCAGAAGAATTTAACCCTTCCCAAA
AACTTACTGAATAAAGAAGAAAACACACTGAAAAACACAATTGTTTTCAGTAATCCTTCTTCAGAATGTA
GTATGAAGGAGGGAATACAGACATGTATGTTTCCTAAGGAAACTGACATTAAAACTTCAGAGAACACAGC
CGAGTTCAAGGAACGGGAGCTCTGTCCACTGAAGACCTCCAAGAAACTACCTGAAAACCATTTACCAAGA
AACTCACCTCAGTACCACCAGCCAGACTTGCCAGAAATTTCCAGGAAAAATAATGGGAATAACCAGCAAG
TACCTGTCAAGAATGAAGTAGATCATTGTGAAAATTTGAAGAAGGTGGACACAAAGCCTTCTTCAGAAAA
GAAGATTCACAAAACATCTAGAGAAGACATGTTTTCTGAGAAACAGGACATACCTTTCGTAGAGCAAGAA
GATCCTTATAGGAAGAAAAAGCTTCAGGAGAAAAGAGAAGGAAATTTACAAAATTTAAATTGGAGTAAAA
GTCGAACATGTAGAAAGAACAAGAAAAGGGGTGTTGCTCCAGTCTCAAGGCCTCCTGAACAGAGTGATCT
AAAGCTTGTGTGCAGTGACTTTGAGAGGTCTGAGCTGAGCAGTGACATCAATGTAAGAAGCTGGTGTATA
CAGGAAAGCACTAGGGAGGTTTGTAAAGCAGATGCCGAAATTGCAAGCAGTTTACCTGCTGCCCAGAGAG
AGGCAGAAGGTTACTACCAGAAGCCTGAGAAGAAATGTGTGGACAAGTTCTGCTCCGATTCCAGCTCTGA
CTGTGGGAGCTCCTCTGGCAGCGTGCGTGCCAGCCGGGGCAGCTGGGGGAGCTGGAGCAGCACCAGCAGC
TCCGACGGGGATAAGAAGCCCATGGTGGACGCCCAGCACTTCCTGCCGGCCGGAGACAGTGTTTCACAAA
ATGATTTTCCTTCTGAAGCTCCCATCTCCTTGAATCTTTCTCATAACATCTGCAATCCCATGACCGTGAA
TAGTCTCCCACAATACGCAGAGCCTTCCTGTCCCAGCCTTCCTGCCGGGCCCACAGGTGTTGAAGAAGAT
AAAGGTCTTTACTCACCTGGAGACCTGTGGCCCACTCCGCCAGTGTGTGTGACAAGCAGCTTAAACTGCA
CCCTGGAGAACGGCGTGCCTTGTGTGATTCAGGAGTCGGCCCCGGTTCATAATAGTTTCATTGATTGGAG
TGCAACATGCGAAGGCCAGTTTTCCAGCGCATACTGTCCATTGGAATTGAACGATTACAATGCCTTTCCA
GAAGAAAACATGAACTATGCCAATGGCTTCCCCTGTCCTGCAGATGTTCAGACAGACTTTATTGATCACA
ACTCTCAGTCTACCTGGAACACCCCACCCAACATGCCTGCTGCCTGGGGACATGCCAGTTTCATCAGCTC
TCCGCCCTACCTCACAAGCACCCGAAGCTTGTCTCCAATGTCTGGACTTTTTGGTTCCATCTGGGCCCCG
CAAAGCGATGTGTATGAAAATTGCTGCCCCATCAACCCCACCACGGAACATTCGACCCACATGGAAAACC
AAGCGGTCGTGTGCAAGGAATACTACCCGGGGTTCAACCCGTTTCGCGCCTATATGAACCTGGACATATG
GACTACCACAGCGAATAGGAATGCAAATTTCCCACTGTCTAGAGACTCGAGTTACTGTGGGAATGTGTGA

Translation (1609 aa):
MAGLRRPQPGCYCRTAAAVNLLLGVFQVLLPCCRPGGAQGQAIEPLPNVVELWQAEEGELLLPTQGDSEE
GLEEPSQEQSFSDKLFSGKGLHFQPSVLDFGIQFLGHPVAKILHAYNPSRDSEVVVNSVFAAAGHFHVPP
VPCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSYGVLSYHVSGIGTRRISTEGSAKQLPNAYFLLPK
VQSIQLSQMQAETTNTSLLQVQLECSLHNKVCQQLKGCYLESDDVLRLQMSIMVTMENFSKEFEENTQHL
LDHLSIVYVATDESETSDDSAVNMYILHSGNSLIWIQDIRHFSQRDALSLQFEPVLLPTSTTNFTKIASF
TCKATSCDSGIIEDVKKTTHTPTLKACLFSSVAQGYFRMDSSATQFHIETHENTSGLWSIWYRNHFDRSV
VLNDVFLSKETKHMLKILNFTGPLFLPPGCWNIFSLKLAVKDIAINLFTNVFLTTNIGAIFAIPLQIYSA
PTKEGSLGFEVIAHCGMHYFMGKSKAGNPNWNGSLSLDQSTWNVDSELANKLYERWKKYKNGDVCKRNVL
GTTRFAHLKKSKESESFVFFLPRLIAEPGLMLNFSATALRSRMIKYFVVQNPSSWPVSLQLLPLSLYPKP
EALVHLLHRWFGTDMQMINFTTGEFQLTEACPYLGTHSEESRFGILHLHLQPLEMKRVGVVFTPADYGKV
TSLILIRNNLTVIDMIGVEGFGARELLKVGGRLPGAGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFK
VENIGPLPITVSSLKINGYNCQGYGFEVLDCHQFSLDPNTSRDISIVFTPDFTSSWVIRDLSLVTAADLE
FRFTLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILMEFMKTRQRQNAS
SSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSRIQNAAKRSPATYGHSQKKHKC
SVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLPAAKEDICTDAMRENWISLRYASGINVNLQKNLTLPK
NLLNKEENTLKNTIVFSNPSSECSMKEGIQTCMFPKETDIKTSENTAEFKERELCPLKTSKKLPENHLPR
NSPQYHQPDLPEISRKNNGNNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQE
DPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWCI
QESTREVCKADAEIASSLPAAQREAEGYYQKPEKKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSS
SDGDKKPMVDAQHFLPAGDSVSQNDFPSEAPISLNLSHNICNPMTVNSLPQYAEPSCPSLPAGPTGVEED
KGLYSPGDLWPTPPVCVTSSLNCTLENGVPCVIQESAPVHNSFIDWSATCEGQFSSAYCPLELNDYNAFP
EENMNYANGFPCPADVQTDFIDHNSQSTWNTPPNMPAAWGHASFISSPPYLTSTRSLSPMSGLFGSIWAP
QSDVYENCCPINPTTEHSTHMENQAVVCKEYYPGFNPFRAYMNLDIWTTTANRNANFPLSRDSSYCGNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH