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Report for CCDS3804.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
3804.1 |
Public |
Homo sapiens |
4 |
NPY5R |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:4889](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:3804.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:4889](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 3804.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000338566.8 |
ENSP00000339377.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000338566.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000339377.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000338566](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000339377](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000506953.1 |
ENSP00000423474.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000506953.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000423474.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000506953](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000423474](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000515560.1 |
ENSP00000423917.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000515560.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000423917.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000515560](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000423917](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001317091.2 |
NP_001304020.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001317091.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001304020.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001317091](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001304020](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001304020.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001317092.2 |
NP_001304021.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001317092.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001304021.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001317092](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001304021](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001304021.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_006174.4 |
NP_006165.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_006174.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_006165.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_006174](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_006165](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_006165.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 3804.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1338 nt): ATGGATTTAGAGCTCGACGAGTATTATAACAAGACACTTGCCACAGAGAATAATACTGCTGCCACTCGGA ATTCTGATTTCCCAGTCTGGGATGACTATAAAAGCAGTGTAGATGACTTACAGTATTTTCTGATTGGGCT CTATACATTTGTAAGTCTTCTTGGCTTTATGGGGAATCTACTTATTTTAATGGCTCTCATGAAAAAGCGT AATCAGAAGACTACGGTAAACTTCCTCATAGGCAATCTGGCCTTTTCTGATATCTTGGTTGTGCTGTTTT GCTCACCTTTCACACTGACGTCTGTCTTGCTGGATCAGTGGATGTTTGGCAAAGTCATGTGCCATATTAT GCCTTTTCTTCAATGTGTGTCAGTTTTGGTTTCAACTTTAATTTTAATATCAATTGCCATTGTCAGGTAT CATATGATAAAACATCCCATATCTAATAATTTAACAGCAAACCATGGCTACTTTCTGATAGCTACTGTCT GGACACTAGGTTTTGCCATCTGTTCTCCCCTTCCAGTGTTTCACAGTCTTGTGGAACTTCAAGAAACATT TGGTTCAGCATTGCTGAGCAGCAGGTATTTATGTGTTGAGTCATGGCCATCTGATTCATACAGAATTGCC TTTACTATCTCTTTATTGCTAGTTCAGTATATTCTGCCCTTAGTTTGTCTTACTGTAAGTCATACAAGTG TCTGCAGAAGTATAAGCTGTGGATTGTCCAACAAAGAAAACAGACTTGAAGAAAATGAGATGATCAACTT AACTCTTCATCCATCCAAAAAGAGTGGGCCTCAGGTGAAACTCTCTGGCAGCCATAAATGGAGTTATTCA TTCATCAAAAAACACAGAAGAAGATATAGCAAGAAGACAGCATGTGTGTTACCTGCTCCAGAAAGACCTT CTCAAGAGAACCACTCCAGAATACTTCCAGAAAACTTTGGCTCTGTAAGAAGTCAGCTCTCTTCATCCAG TAAGTTCATACCAGGGGTCCCCACTTGCTTTGAGATAAAACCTGAAGAAAATTCAGATGTTCATGAATTG AGAGTAAAACGTTCTGTTACAAGAATAAAAAAGAGATCTCGAAGTGTTTTCTACAGACTGACCATACTGA TATTAGTATTTGCTGTTAGTTGGATGCCACTACACCTTTTCCATGTGGTAACTGATTTTAATGACAATCT TATTTCAAATAGGCATTTCAAGTTGGTGTATTGCATTTGTCATTTGTTGGGCATGATGTCCTGTTGTCTT AATCCAATTCTATATGGGTTTCTTAATAATGGGATTAAAGCTGATTTAGTGTCCCTTATACACTGTCTTC ATATGTAA
Translation (445 aa): MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMKKR NQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLILISIAIVRY HMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFHSLVELQETFGSALLSSRYLCVESWPSDSYRIA FTISLLLVQYILPLVCLTVSHTSVCRSISCGLSNKENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYS FIKKHRRRYSKKTACVLPAPERPSQENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHEL RVKRSVTRIKKRSRSVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCL NPILYGFLNNGIKADLVSLIHCLHM
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