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Report for CCDS3857.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3857.1 Public Homo sapiens 5 ZDHHC11 24 110 108 CCDS HistoryNCBI Gene:79844Re-query CCDS DB by CCDS ID:3857.1Re-query CCDS DB by GeneID:79844See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3857.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000283441.13 ENSP00000283441.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000283441.13Link to Ensembl Protein Viewer:ENSP00000283441.8Re-query CCDS DB by Nucleotide ID:ENST00000283441Re-query CCDS DB by Protein ID:ENSP00000283441
Original member Current member NCBI NM_024786.3 NP_079062.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024786.3Link to Protein Sequence:NP_079062.1Re-query CCDS DB by Nucleotide ID:NM_024786Re-query CCDS DB by Protein ID:NP_079062Link to BLAST:NP_079062.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079062.1 412 Q9H8X9-1 412 100% 0 0

Chromosomal Locations for CCDS 3857.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 801107 801164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 814761 814795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 819525 819612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 821861 821895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 825164 825251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 833773 833807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 837365 837480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 840495 840650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 843600 843724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 847514 847615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 848482 848660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 850381 850602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1239 nt):
ATGGACACCCGCTCCGGGAGCCAGTGTTCCGTCACCCCAGAAGCCATACTCAATAATGAAAAGCTGGTCT
TGCCGCCCCGCATCTCCAGAGTGAACGGCTGGTCGTTACCCCTGCACTACTTCCAGGTGGTGACCTGGGC
TGTCTTCGTGGGCCTTTCCTCGGCCACCTTCGGGATCTTCATTCCCTTCCTGCCTCACGCGTGGAAATAC
ATTGCCTACGTGGTGACCGGGGGGATCTTCTCGTTCCACCTCGTCGTCCACCTGATCGCGTCCTGCATCG
ACCCGGCCGACTCCAATGTCAGACTCATGAAGAACTATTCTCAGCCCATGCCCCTCTTCGACAGATCAAA
ACATGCACACGTGATCCAGAATCAGTTCTGCCACCTGTGCAAGGTCACCGTGAACAAGAAAACCAAACAC
TGCATTTCCTGCAATAAGTGTGTGTCCGGCTTCGACCACCACTGCAAATGGATCAACAACTGCGTGGGAA
GCCGGAATTATTGGTTCTTCTTCAGCACTGTGGCCTCGGCCACAGCTGGCATGCTCTGCCTGATCGCCAT
CCTGCTGTATGTCCTCGTCCAGTACCTCGTGAACCCCGGGGTGCTCCGCACGGACCCCAGGTATGAAGAT
GTCAAGAATATGAACACGTGGCTGCTGTTCCTCCCCCTGTTCCCGGTGCAGGTGCAGACCCTGATAGTCG
TGATCATCGGGATGCTCGTGCTCCTGCTGGACTTTCTTGGCTTGGTGCACCTGGGCCAGCTGCTCATCTT
CCACATCTACCTGAAGGCCAAGAAGATGACCACCTTTGAGTATCTCATTAATAACCGCAAAGAAGAGAGT
TCAAAACATCAAGCAGTGAGGAAAGATCCATACGTGCAAATGGACAAAGGAGTTCTCCAGCAAGGAGCTG
GCGCCCTGGGCTCATCTGCACAGGGAGTCAAAGCCAAGAGCTCCCTGCTGATTCACAAGCACTTATGTCA
CTTCTGCACTTCAGTAAACCAGGATGGGGATTCGACGGCACGGGAAGGGGATGAAGACCCGTGTCCATCT
GCACTTGGAGCCAAGGCCAGGAACTCCCGGCTGATTTGCAGGCGCCTGTGTCAGTTCTCCACTCGTGTAC
ACCCAGACGGGGGCTCGATGGCACAGGAAGCAGATGATGCCCCGAGTATATCTACACTTGGGCTGCAACA
AGAAACAACAGAGCCCATGAAAACTGACAGTGCTGAAAGTGAAGACTGA

Translation (412 aa):
MDTRSGSQCSVTPEAILNNEKLVLPPRISRVNGWSLPLHYFQVVTWAVFVGLSSATFGIFIPFLPHAWKY
IAYVVTGGIFSFHLVVHLIASCIDPADSNVRLMKNYSQPMPLFDRSKHAHVIQNQFCHLCKVTVNKKTKH
CISCNKCVSGFDHHCKWINNCVGSRNYWFFFSTVASATAGMLCLIAILLYVLVQYLVNPGVLRTDPRYED
VKNMNTWLLFLPLFPVQVQTLIVVIIGMLVLLLDFLGLVHLGQLLIFHIYLKAKKMTTFEYLINNRKEES
SKHQAVRKDPYVQMDKGVLQQGAGALGSSAQGVKAKSSLLIHKHLCHFCTSVNQDGDSTAREGDEDPCPS
ALGAKARNSRLICRRLCQFSTRVHPDGGSMAQEADDAPSISTLGLQQETTEPMKTDSAESED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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