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Report for CCDS389.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
389.1 Public Homo sapiens 1 ZMYM4 24 110 108 CCDS HistoryNCBI Gene:9202Re-query CCDS DB by CCDS ID:389.1Re-query CCDS DB by GeneID:9202See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 389.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314607.11 ENSP00000322915.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314607.11Link to Ensembl Protein Viewer:ENSP00000322915.6Re-query CCDS DB by Nucleotide ID:ENST00000314607Re-query CCDS DB by Protein ID:ENSP00000322915
Original member Current member NCBI NM_005095.3 NP_005086.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005095.3Link to Protein Sequence:NP_005086.2Re-query CCDS DB by Nucleotide ID:NM_005095Re-query CCDS DB by Protein ID:NP_005086Link to BLAST:NP_005086.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005086.2 1548 Q5VZL5-1 1548 100% 0 0

Chromosomal Locations for CCDS 389.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 35269047 35269085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35325360 35325405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35358925 35359446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35361194 35361255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35361619 35361789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35370029 35370113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35370372 35370627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35381259 35381433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35381546 35381758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35385442 35385592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35386074 35386189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35387003 35387278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35387454 35387604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35388910 35389082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35389948 35390098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35392212 35392352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35392647 35392684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35393595 35393739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35396552 35396670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35397377 35397545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35398413 35398466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35398864 35399043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35399482 35399576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35405023 35405194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35405373 35405468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35408008 35408159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35413972 35414083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35415466 35415714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35418443 35418572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35419470 35419677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4647 nt):
ATGGCGGAGAGAGAGGTGGAGTCCGGCCCCCGAAAGAGGTTTGAACAAAAAAGTGGTGCAGTTTTTGATG
AAATTGTAGAGAACTGTGGTGGTATCATGGATACAGAAATGTCTGAAGATATAGACCACAACTTAACTCC
TACCCTTGACAGCATGTCTTATGGAATGCCGAATCAAACAGGATCTGAAAATTCATTGCTGGATGAAGAT
GATTATTTTTTGAACTCTGGGGATCTTGCAGGAATTCCAGTCGTTGGTAGTGACAATGAGGATGAACAGG
ATTTTAGTTCAAAGGACAATCTTGTTTCTTCAATTCATACTGATGATAGCTTGGAAGTAGAGAGAAGAGT
CACACAGCATGAATCAGACAATGAAAATGAAATACAAATTCAAAATAAGTTAAAAAAAGACTTTCCTAAA
CAATTTGATCAGGTTTCTGTCTTTAAATCAATACGGAAAGATTTTAGTCTAGTAAGAGAAAACAGCAAAG
AGACATTTTCTGGAAAGGAGAAAAATAGAGACCTAACTTATGAACGTGAAAAACGGTTGGATAAACCCCA
TAAAGATTTGGATTCAAGGTTGAAAAGCAGTTTTTTTGATAAAGCAGCTAATCAAGTTGAAGAAACATTA
CATACCCATTTACCACAAACCCCAGAAACAAACTTTAGGGATTCCAGCTACCCATTTGCCAATAAAGAAT
CCATTGGTTCGGAACTGGGGAATTCCTTTGCATCAAATATTAGAATTAAAGAAGAACCTTTGGATGATGA
GTATGACAAAGCAATGGCACCACAGCAGGGACTACTAGACAAAATAAAAGATGAACCTGACAATGCTCAA
GAGTATAGTCATGGCCAACAGCAAAAAACTCAAGAGGGGGAACTGAAAATTAGTGCTGTGTTTTCAGTCA
GTGGCAGCCCTCTTGCTCCACAGTTGACTACTGGCTTTCAGCCCTCACTGGCGTCATCTGGCATGAATAA
AATGCTTCCTTCAGTTCCAGCCACAGCTGTTCGAGTTTCCTGTTCTGGTTGTAAAAAAATCCTCCAGAAG
GGGCAAACTGCTTATCAGAGGAAAGGGTCTACTCAGCTATTCTGCTCCACACTGTGCCTCACTGGATATA
CAGTTCCACCTGCCCGCCCACCGCCTCCTCTCACCAAGAAAACTTGTTCAAGTTGCTCAAAAGACATTTT
AAATCCAAAGGATGTGATCAGTGCCCAGTTTGAAAACACCACCACTAGTAAAGATTTTTGCAGTCAGTCA
TGTTTGTCAACATATGAACTGAAAAAAAAACCTATTGTTACCATAAATACAAATAGTATTTCAACCAAAT
GCAGCATGTGTCAGAAGAATGCTGTTATTCGACATGAAGTTAATTACCAGAATGTGGTCCATAAACTTTG
CAGTGATGCCTGCTTCTCTAAGTTTCGTTCTGCTAACAACCTCACCATGAACTGTTGTGAGAACTGTGGG
GGTTACTGTTACAGTGGGTCGGGACAATGCCACATGCTTCAGATAGAGGGACAGTCTAAGAAGTTTTGTA
GTTCATCGTGTATCACGGCATACAAGCAGAAATCAGCCAAAATTACACCGTGTGCGCTTTGCAAATCATT
GAGATCCTCAGCAGAAATGATTGAAAATACCAATAGCTTGGGGAAGACAGAGCTTTTCTGTTCTGTTAAT
TGCTTATCTGCTTACAGAGTTAAAATGGTTACTTCTGCAGGTGTACAAGTTCAGTGTAACAGTTGTAAAA
CCTCAGCAATTCCTCAGTATCACCTAGCCATGTCAGATGGAAGTATACGCAACTTCTGCAGCTACAGCTG
TGTGGTAGCTTTCCAGAATTTATTCAACAAACCAACTGGAATGAATTCTTCAGTAGTGCCCTTGTCTCAG
GGCCAAGTAATTGTAAGCATCCCCACAGGTTCCACAGTGTCAGCCGGAGGAGGTAGCACATCTGCTGTTT
CTCCCACCTCCATCAGTAGCTCTGCTGCAGCTGGTCTCCAGCGTCTCGCTGCCCAGTCCCAGCATGTTGG
GTTTGCACGAAGTGTTGTGAAACTCAAATGTCAACACTGTAACCGTCTTTTTGCCACAAAACCAGAACTT
CTTGACTATAAGGGCAAAATGTTTCAGTTCTGTGGCAAGAATTGTTCTGATGAATATAAGAAAATAAATA
ATGTAATGGCAATGTGTGAATATTGTAAAATTGAGAAAATTGTAAAGGAGACTGTTCGGTTCTCAGGTGC
TGACAAGTCATTCTGTAGTGAAGGTTGCAAATTGCTTTATAAACATGACTTGGCAAAACGCTGGGGAAAT
CACTGTAAAATGTGCAGTTATTGTTTACAGACATCTCCCAAATTGGTACAGAATAATTTAGGAGGGAAAG
TGGAAGAGTTCTGTTGTGAAGAATGCATGTCCAAATATACAGTTTTGTTCTATCAGATGGCCAAATGTGA
TGCTTGTAAGCGACAGGGTAAACTCAGTGAGTCCTTGAAATGGCGAGGGGAAATGAAACATTTCTGTAAC
CTGCTTTGTATCTTGATGTTCTGTAATCAGCAAAGTGTATGTGACCCGCCTTCACAAAATAATGCAGCAA
ATATTTCCATGGTTCAAGCTGCTTCAGCAGGACCCCCATCTCTGAGAAAAGATTCGACTCCAGTTATAGC
CAATGTAGTATCATTGGCAAGTGCCCCTGCTGCTCAGCCTACAGTGAATTCTAACAGTGTCTTACAAGGT
GCAGTTCCAACAGTAACAGCGAAAATCATCGGTGATGCAAGTACTCAAACAGATGCCCTGAAACTGCCAC
CTTCCCAACCTCCAAGGCTTTTGAAGAACAAAGCTTTATTATGCAAACCCATCACACAGACTAAAGCCAC
CTCTTGCAAACCACATACCCAAAACAAAGAATGCCAGACAGAAGACACTCCAAGTCAGCCCCAGATTATT
GTGGTGCCAGTTCCCGTACCAGTGTTTGTTCCCATACCTCTTCACCTTTATACTCAATATGCTCCAGTCC
CATTTGGAATTCCAGTTCCAATGCCTGTCCCTATGCTTATTCCATCTTCAATGGATAGTGAAGATAAAGT
CACAGAGAGTATTGAAGACATTAAAGAAAAGCTTCCCACACATCCATTTGAAGCTGATCTCCTTGAGATG
GCAGAAATGATTGCAGAAGATGAAGAGAAGAAGACTCTATCTCAGGGAGAGTCCCAAACTTCTGAACACG
AACTCTTTCTAGACACCAAGATATTTGAAAAAGACCAAGGAAGTACATACAGTGGTGATCTTGAATCAGA
GGCAGTATCTACTCCACATAGCTGGGAGGAAGAGCTGAATCACTATGCCTTAAAGTCAAATGCTGTGCAA
GAGGCTGATTCAGAATTGAAGCAGTTCTCAAAAGGGGAAACTGAACAGGACCTGGAAGCAGATTTTCCAT
CAGACTCCTTTGACCCACTTAATAAAGGACAGGGAATCCAGGCACGTTCCCGAACAAGACGACGACACAG
AGATGGCTTCCCCCAACCCAGACGAAGAGGACGGAAGAAGTCTATAGTGGCTGTGGAGCCCAGGAGTCTT
ATTCAAGGAGCCTTTCAAGGCTGCTCAGTGTCCGGGATGACACTGAAATACATGTATGGGGTAAATGCTT
GGAAGAACTGGGTTCAGTGGAAAAATGCCAAGGAAGAGCAGGGGGATCTAAAATGTGGAGGGGTTGAACA
GGCCTCATCTAGCCCACGTTCTGACCCCTTAGGAAGTACTCAAGACCATGCACTCTCTCAAGAATCCTCA
GAGCCAGGCTGTAGAGTCCGCTCTATCAAGCTGAAGGAAGACATTCTGTCCTGCACTTTTGCTGAGTTGA
GTTTGGGCTTATGCCAGTTTATCCAAGAGGTGCGGAGACCAAATGGTGAAAAATATGATCCAGACAGTAT
CTTATACTTGTGCCTTGGAATTCAACAGTACCTGTTTGAAAATGGTAGAATAGATAACATTTTTACTGAG
CCCTATTCCAGATTTATGATTGAACTTACCAAACTCTTGAAAATATGGGAACCTACAATACTTCCTAATG
GTTACATGTTCTCTCGCATTGAGGAAGAGCATTTGTGGGAGTGCAAACAGCTGGGCGCTTACTCACCAAT
CGTCCTTTTAAACACCCTCCTTTTCTTCAATACCAAATACTTCCAACTAAAGAATGTTACTGAGCACTTG
AAGCTTTCCTTTGCCCATGTGATGAGACGGACCAGGACTCTGAAGTACAGTACCAAGATGACATATCTGA
GGTTCTTCCCACCTTTACAGAAGCAGGAGTCAGAACCAGATAAACTGACTGTTGGCAAGAGGAAACGAAA
TGAAGATGATGAGGTTCCAGTGGGGGTGGAGATGGCAGAGAATACTGACAATCCACTAAGATGCCCAGTC
CGACTTTATGAGTTTTACCTGTCAAAATGTTCTGAAAGTGTGAAGCAAAGGAATGATGTGTTTTACCTTC
AACCTGAGCGCTCCTGTGTCCCGAATAGCCCCATGTGGTACTCCACATTCCCGATAGACCCTGGAACCCT
GGACACCATGTTAACACGTATTCTCATGGTGAGGGAGGTACATGAAGAACTTGCCAAAGCCAAATCTGAA
GACTCTGATGTTGAATTATCAGATTAA

Translation (1548 aa):
MAEREVESGPRKRFEQKSGAVFDEIVENCGGIMDTEMSEDIDHNLTPTLDSMSYGMPNQTGSENSLLDED
DYFLNSGDLAGIPVVGSDNEDEQDFSSKDNLVSSIHTDDSLEVERRVTQHESDNENEIQIQNKLKKDFPK
QFDQVSVFKSIRKDFSLVRENSKETFSGKEKNRDLTYEREKRLDKPHKDLDSRLKSSFFDKAANQVEETL
HTHLPQTPETNFRDSSYPFANKESIGSELGNSFASNIRIKEEPLDDEYDKAMAPQQGLLDKIKDEPDNAQ
EYSHGQQQKTQEGELKISAVFSVSGSPLAPQLTTGFQPSLASSGMNKMLPSVPATAVRVSCSGCKKILQK
GQTAYQRKGSTQLFCSTLCLTGYTVPPARPPPPLTKKTCSSCSKDILNPKDVISAQFENTTTSKDFCSQS
CLSTYELKKKPIVTINTNSISTKCSMCQKNAVIRHEVNYQNVVHKLCSDACFSKFRSANNLTMNCCENCG
GYCYSGSGQCHMLQIEGQSKKFCSSSCITAYKQKSAKITPCALCKSLRSSAEMIENTNSLGKTELFCSVN
CLSAYRVKMVTSAGVQVQCNSCKTSAIPQYHLAMSDGSIRNFCSYSCVVAFQNLFNKPTGMNSSVVPLSQ
GQVIVSIPTGSTVSAGGGSTSAVSPTSISSSAAAGLQRLAAQSQHVGFARSVVKLKCQHCNRLFATKPEL
LDYKGKMFQFCGKNCSDEYKKINNVMAMCEYCKIEKIVKETVRFSGADKSFCSEGCKLLYKHDLAKRWGN
HCKMCSYCLQTSPKLVQNNLGGKVEEFCCEECMSKYTVLFYQMAKCDACKRQGKLSESLKWRGEMKHFCN
LLCILMFCNQQSVCDPPSQNNAANISMVQAASAGPPSLRKDSTPVIANVVSLASAPAAQPTVNSNSVLQG
AVPTVTAKIIGDASTQTDALKLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQNKECQTEDTPSQPQII
VVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDKVTESIEDIKEKLPTHPFEADLLEM
AEMIAEDEEKKTLSQGESQTSEHELFLDTKIFEKDQGSTYSGDLESEAVSTPHSWEEELNHYALKSNAVQ
EADSELKQFSKGETEQDLEADFPSDSFDPLNKGQGIQARSRTRRRHRDGFPQPRRRGRKKSIVAVEPRSL
IQGAFQGCSVSGMTLKYMYGVNAWKNWVQWKNAKEEQGDLKCGGVEQASSSPRSDPLGSTQDHALSQESS
EPGCRVRSIKLKEDILSCTFAELSLGLCQFIQEVRRPNGEKYDPDSILYLCLGIQQYLFENGRIDNIFTE
PYSRFMIELTKLLKIWEPTILPNGYMFSRIEEEHLWECKQLGAYSPIVLLNTLLFFNTKYFQLKNVTEHL
KLSFAHVMRRTRTLKYSTKMTYLRFFPPLQKQESEPDKLTVGKRKRNEDDEVPVGVEMAENTDNPLRCPV
RLYEFYLSKCSESVKQRNDVFYLQPERSCVPNSPMWYSTFPIDPGTLDTMLTRILMVREVHEELAKAKSE
DSDVELSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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