CCDS Report for Consensus CDS

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Report for CCDS3928.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
3928.1	Public	Homo sapiens	5	OSMR	24	110	108

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3928.1

Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status
EBI	ENST00000274276.8	ENSP00000274276.3	MANE Select	Accepted	alive
NCBI	NM_001323505.2	NP_001310434.1		Accepted	alive
NCBI	NM_003999.3	NP_003990.1	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001310434.1	979	Q99650-1	979	100%	0	0
NP_003990.1	979	Q99650-1	979	100%	0	0

Chromosomal Locations for CCDS 3928.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)

Genome Browser links:

Chromosome	Start	Stop
5	38869045	38869117
5	38876201	38876373
5	38881593	38881764
5	38883827	38884111
5	38885349	38885484
5	38886039	38886190
5	38903882	38904024
5	38904353	38904503
5	38917546	38917622
5	38918840	38919062
5	38921615	38921794
5	38923150	38923254
5	38924422	38924595
5	38925204	38925371
5	38931883	38931964
5	38932463	38932535
5	38932872	38933444

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2940 nt):
ATGGCTCTATTTGCAGTCTTTCAGACAACATTCTTCTTAACATTGCTGTCCTTGAGGACTTACCAGAGTG AAGTCTTGGCTGAACGTTTACCATTGACTCCTGTATCACTTAAAGTTTCCACCAATTCTACGCGTCAGAG TTTGCACTTACAATGGACTGTCCACAACCTTCCTTATCATCAGGAATTGAAAATGGTATTTCAGATCCAG ATCAGTAGGATTGAAACATCCAATGTCATCTGGGTGGGGAATTACAGCACCACTGTGAAGTGGAACCAGG TTCTGCATTGGAGCTGGGAATCTGAGCTCCCTTTGGAATGTGCCACACACTTTGTAAGAATAAAGAGTTT GGTGGACGATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACTGGAGTTCCTGGGAGGAAGTCAGTGTA CAAGATTCTACTGGACAGGATATATTGTTCGTTTTCCCTAAAGATAAGCTGGTGGAAGAAGGCACCAATG TTACCATTTGTTACGTTTCTAGGAACATTCAAAATAATGTATCCTGTTATTTGGAAGGGAAACAGATTCA TGGAGAACAACTTGATCCACATGTAACTGCATTCAACTTGAATAGTGTGCCTTTCATTAGGAATAAAGGG ACAAATATCTATTGTGAGGCAAGTCAAGGAAATGTCAGTGAAGGCATGAAAGGCATCGTTCTTTTTGTCT CAAAAGTACTTGAGGAGCCCAAGGACTTTTCTTGTGAAACCGAGGACTTCAAGACTTTGCACTGTACTTG GGATCCTGGGACGGACACTGCCTTGGGGTGGTCTAAACAACCTTCCCAAAGCTACACTTTATTTGAATCA TTTTCTGGGGAAAAGAAACTTTGTACACACAAAAACTGGTGTAATTGGCAAATAACTCAAGACTCACAAG AAACCTATAACTTCACACTCATAGCTGAAAATTACTTAAGGAAGAGAAGTGTCAATATCCTTTTTAACCT GACTCATCGAGTTTATTTAATGAATCCTTTTAGTGTCAACTTTGAAAATGTAAATGCCACAAATGCCATC ATGACCTGGAAGGTGCACTCCATAAGGAATAATTTCACATATTTGTGTCAGATTGAACTCCATGGTGAAG GAAAAATGATGCAATACAATGTTTCCATCAAGGTGAACGGTGAGTACTTCTTAAGTGAACTGGAACCTGC CACAGAGTACATGGCGCGAGTACGGTGTGCTGATGCCAGCCACTTCTGGAAATGGAGTGAATGGAGTGGT CAGAACTTCACCACACTTGAAGCTGCTCCCTCAGAGGCCCCTGATGTCTGGAGAATTGTGAGCTTGGAGC CAGGAAATCATACTGTGACCTTATTCTGGAAGCCATTATCAAAACTGCATGCCAATGGAAAGATCCTGTT CTATAATGTAGTTGTAGAAAACCTAGACAAACCATCCAGTTCAGAGCTCCATTCCATTCCAGCACCAGCC AACAGCACAAAACTAATCCTTGACAGGTGTTCCTACCAAATCTGCGTCATAGCCAACAACAGTGTGGGTG CTTCTCCTGCTTCTGTAATAGTCATCTCTGCAGACCCCGAAAACAAAGAGGTTGAGGAAGAAAGAATTGC AGGCACAGAGGGTGGATTCTCTCTGTCTTGGAAACCCCAACCTGGAGATGTTATAGGCTATGTTGTGGAC TGGTGTGACCATACCCAGGATGTGCTCGGTGATTTCCAGTGGAAGAATGTAGGTCCCAATACCACAAGCA CAGTCATTAGCACAGATGCTTTTAGGCCAGGAGTTCGATATGACTTCAGAATTTATGGGTTATCTACAAA AAGGATTGCTTGTTTATTAGAGAAAAAAACAGGATACTCTCAGGAACTTGCTCCTTCAGACAACCCTCAC GTGCTGGTGGATACATTGACATCCCACTCCTTCACTCTGAGTTGGAAAGATTACTCTACTGAATCTCAAC CTGGTTTTATACAAGGGTACCATGTCTATCTGAAATCCAAGGCGAGGCAGTGCCACCCACGATTTGAAAA GGCAGTTCTTTCAGATGGTTCAGAATGTTGCAAATACAAAATTGACAACCCGGAAGAAAAGGCATTGATT GTGGACAACCTAAAGCCAGAATCCTTCTATGAGTTTTTCATCACTCCATTCACTAGTGCTGGTGAAGGCC CCAGTGCTACGTTCACGAAGGTCACGACTCCGGATGAACACTCCTCGATGCTGATTCATATCCTACTGCC CATGGTTTTCTGCGTCTTGCTCATCATGGTCATGTGCTACTTGAAAAGTCAGTGGATCAAGGAGACCTGT TATCCTGACATCCCTGACCCTTACAAGAGCAGCATCCTGTCATTAATAAAATTCAAGGAGAACCCTCACC TAATAATAATGAATGTCAGTGACTGTATCCCAGATGCTATTGAAGTTGTAAGCAAGCCAGAAGGGACAAA GATACAGTTCCTAGGCACTAGGAAGTCACTCACAGAAACCGAGTTGACTAAGCCTAACTACCTTTATCTC CTTCCAACAGAAAAGAATCACTCTGGCCCTGGCCCCTGCATCTGTTTTGAGAACTTGACCTATAACCAGG CAGCTTCTGACTCTGGCTCTTGTGGCCATGTTCCAGTATCCCCAAAAGCCCCAAGTATGCTGGGACTAAT GACCTCACCTGAAAATGTACTAAAGGCACTAGAAAAAAACTACATGAACTCCCTGGGAGAAATCCCAGCT GGAGAAACAAGTTTGAATTATGTGTCCCAGTTGGCTTCACCCATGTTTGGAGACAAGGACAGTCTCCCAA CAAACCCAGTAGAGGCACCACACTGTTCAGAGTATAAAATGCAAATGGCAGTCTCCCTGCGTCTTGCCTT GCCTCCCCCGACCGAGAATAGCAGCCTCTCCTCAATTACCCTTTTAGATCCAGGTGAACACTACTGCTAA
Translation (979 aa):
MALFAVFQTTFFLTLLSLRTYQSEVLAERLPLTPVSLKVSTNSTRQSLHLQWTVHNLPYHQELKMVFQIQ ISRIETSNVIWVGNYSTTVKWNQVLHWSWESELPLECATHFVRIKSLVDDAKFPEPNFWSNWSSWEEVSV QDSTGQDILFVFPKDKLVEEGTNVTICYVSRNIQNNVSCYLEGKQIHGEQLDPHVTAFNLNSVPFIRNKG TNIYCEASQGNVSEGMKGIVLFVSKVLEEPKDFSCETEDFKTLHCTWDPGTDTALGWSKQPSQSYTLFES FSGEKKLCTHKNWCNWQITQDSQETYNFTLIAENYLRKRSVNILFNLTHRVYLMNPFSVNFENVNATNAI MTWKVHSIRNNFTYLCQIELHGEGKMMQYNVSIKVNGEYFLSELEPATEYMARVRCADASHFWKWSEWSG QNFTTLEAAPSEAPDVWRIVSLEPGNHTVTLFWKPLSKLHANGKILFYNVVVENLDKPSSSELHSIPAPA NSTKLILDRCSYQICVIANNSVGASPASVIVISADPENKEVEEERIAGTEGGFSLSWKPQPGDVIGYVVD WCDHTQDVLGDFQWKNVGPNTTSTVISTDAFRPGVRYDFRIYGLSTKRIACLLEKKTGYSQELAPSDNPH VLVDTLTSHSFTLSWKDYSTESQPGFIQGYHVYLKSKARQCHPRFEKAVLSDGSECCKYKIDNPEEKALI VDNLKPESFYEFFITPFTSAGEGPSATFTKVTTPDEHSSMLIHILLPMVFCVLLIMVMCYLKSQWIKETC YPDIPDPYKSSILSLIKFKENPHLIIMNVSDCIPDAIEVVSKPEGTKIQFLGTRKSLTETELTKPNYLYL LPTEKNHSGPGPCICFENLTYNQAASDSGSCGHVPVSPKAPSMLGLMTSPENVLKALEKNYMNSLGEIPA GETSLNYVSQLASPMFGDKDSLPTNPVEAPHCSEYKMQMAVSLRLALPPPTENSSLSSITLLDPGEHYC

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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