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Report for CCDS41268.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41268.1 Public Homo sapiens 1 KAZN 24 110 108 CCDS HistoryNCBI Gene:23254Re-query CCDS DB by CCDS ID:41268.1Re-query CCDS DB by GeneID:23254See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41268.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400797.3 ENSP00000383601.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400797.3Link to Ensembl Protein Viewer:ENSP00000383601.3Re-query CCDS DB by Nucleotide ID:ENST00000400797Re-query CCDS DB by Protein ID:ENSP00000383601
Original member Current member EBI ENST00000400798.6 ENSP00000383602.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400798.6Link to Ensembl Protein Viewer:ENSP00000383602.2Re-query CCDS DB by Nucleotide ID:ENST00000400798Re-query CCDS DB by Protein ID:ENSP00000383602
Original member Current member NCBI NM_001017999.3 NP_001017999.1 Accepted alive Link to Nucleotide Sequence:NM_001017999.3Link to Protein Sequence:NP_001017999.1Re-query CCDS DB by Nucleotide ID:NM_001017999Re-query CCDS DB by Protein ID:NP_001017999Link to BLAST:NP_001017999.1
Original member Current member NCBI NM_001018001.3 NP_001018001.1 Accepted alive Link to Nucleotide Sequence:NM_001018001.3Link to Protein Sequence:NP_001018001.1Re-query CCDS DB by Nucleotide ID:NM_001018001Re-query CCDS DB by Protein ID:NP_001018001Link to BLAST:NP_001018001.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017999.1 327 Q674X7-4 327 100% 0 0
NP_001018001.1 327 Q674X7-4 327 100% 0 0

Chromosomal Locations for CCDS 41268.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 14960740 14960875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15034749 15034885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15043989 15044159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15056091 15056280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15060172 15060302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15063572 15063622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15065630 15065797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGAAGGAGATGTTGGCGAAGGACCTGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCA
CCGAGCTCAGGGTCCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCAT
GAAAGCTGATCGGAAGCGCTTAAAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCC
ACACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGCG
AGGATGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCTGGAGCGTGAGAAGTGGGAGCTGCGGCGCCA
AGCCAAGGAGGCCACAGACCACGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAG
GAGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGC
ATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCC
GCTGACCGCAGCCATCCGGCAGAGTCAACAGACTCTCTACCACTCACACCCCCCTCACCCTGCGGACCGG
CAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTGCCGCCGAAG
GCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGGCGA
CAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGATCTTGAAGACCAA
AAACGGAAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGC
GGAAGTCCCTCGACCCCGGCCTCTTTGATGGTACCGCCCCTGATTATTACATAGAGGAGGACGCGGACTG
GTGA

Translation (327 aa):
MKEMLAKDLEESQGGKSSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKTDLVSQMQQLYA
TLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAKEATDHATALRSQLDLKDNRMK
ELEAELAMAKQSLATLTKDVPKRHSLAMPGETVLNGNQEWVVQADLPLTAAIRQSQQTLYHSHPPHPADR
QAVRVSPCHSRQPSVISDASAAEGDRSSTPSDINSPRHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQ
KRKKKKEKMGFGSISRVFARGKQRKSLDPGLFDGTAPDYYIEEDADW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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