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Report for CCDS41284.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
41284.1 |
Public |
Homo sapiens |
1 |
MTFR1L |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:56181](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:41284.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:56181](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 41284.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000374300.7 |
ENSP00000363418.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000374300.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000363418.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000374300](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000363418](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000374301.7 |
ENSP00000363419.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000374301.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000363419.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000374301](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000363419](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000374303.7 |
ENSP00000363421.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000374303.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000363421.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000374303](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000363421](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001099625.2 |
NP_001093095.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001099625.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001093095.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001099625](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001093095](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001093095.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001099626.2 |
NP_001093096.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001099626.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001093096.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001099626](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001093096](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001093096.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_019557.6 |
NP_062457.3 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_019557.6](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_062457.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_019557](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_062457](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_062457.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 41284.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (879 nt): ATGTCAGGAATGGAAGCCACTGTGACCATCCCAATCTGGCAAAACAAGCCACATGGGGCTGCTCGAAGTG TAGTAAGAAGAATTGGGACCAACCTACCCTTGAAGCCGTGTGCCCGGGCGTCCTTTGAGACCCTGCCCAA CATCTCTGACCTGTGTTTGAGAGATGTGCCCCCAGTCCCTACCCTGGCTGACATCGCCTGGATTGCTGCG GATGAAGAGGAGACATATGCCCGGGTCAGGAGTGATACGCGCCCCCTGAGGCACACCTGGAAACCCAGCC CTCTGATTGTCATGCAGCGCAATGCCTCTGTTCCCAACCTGCGTGGGTCCGAGGAGAGGCTTCTGGCCCT GAAGAAGCCAGCTCTGCCAGCCCTAAGCCGCACTACTGAGCTGCAGGACGAGCTGAGCCACTTGCGCAGC CAGATTGCAAAGATAGTGGCAGCTGATGCAGCTTCGGCTTCATTAACGCCAGATTTCTTATCTCCAGGAA GTTCAAATGTCTCTTCTCCCTTACCTTGTTTTGGATCCTCATTCCACTCTACAACTTCCTTTGTCATTAG TGACATCACCGAGGAGACAGAGGTGGAGGTCCCTGAGCTTCCATCAGTCCCCCTGCTTTGTTCTGCCAGC CCTGAATGTTGCAAACCAGAACACAAAGCTGCCTGCAGTTCGTCTGAAGAGGATGACTGCGTCTCTTTGT CCAAGGCCAGCAGCTTTGCAGACATGATGGGTATCCTGAAGGACTTTCACCGAATGAAACAGAGTCAAGA TCTGAACCGGAGTTTATTGAAGGAGGAAGACCCTGCTGTGCTTATCTCTGAGGTCCTAAGGAGGAAGTTT GCTCTAAAGGAAGAAGATATCAGTAGAAAAGGAAATTGA
Translation (292 aa): MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVPTLADIAWIAA DEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKPALPALSRTTELQDELSHLRS QIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHSTTSFVISDITEETEVEVPELPSVPLLCSAS PECCKPEHKAACSSSEEDDCVSLSKASSFADMMGILKDFHRMKQSQDLNRSLLKEEDPAVLISEVLRRKF ALKEEDISRKGN
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