NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS41412.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41412.1 Public Homo sapiens 1 RUSC1 24 110 108 CCDS HistoryNCBI Gene:23623Re-query CCDS DB by CCDS ID:41412.1Re-query CCDS DB by GeneID:23623See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41412.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368347.8 ENSP00000357331.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368347.8Link to Ensembl Protein Viewer:ENSP00000357331.4Re-query CCDS DB by Nucleotide ID:ENST00000368347Re-query CCDS DB by Protein ID:ENSP00000357331
Original member Current member NCBI NM_001105205.1 NP_001098675.1 Accepted alive Link to Nucleotide Sequence:NM_001105205.1Link to Protein Sequence:NP_001098675.1Re-query CCDS DB by Nucleotide ID:NM_001105205Re-query CCDS DB by Protein ID:NP_001098675Link to BLAST:NP_001098675.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001098675.1 492 Q9BVN2-3 492 100% 0 0

Chromosomal Locations for CCDS 41412.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 155324418 155324544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155324845 155324943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155325102 155325178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155325316 155325490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155325567 155325672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155325864 155325910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155326580 155327132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155328150 155328275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155330403 155330571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGCCGCCCACGTGCTCCCCGGGGCTCCGCAGGCAGGACTGGGCCCCGGGGCGGTGCGCTGGGCTACACC
TCCCTCCCCGCGCCCCGTCCTCTCCCGCCCTACAGGCCCTAGCAGGGCAGGCGGGAGTCCGTAGTTCGTG
GTCCTTCGCCGGTGTCCCCGGAGCCCAGCGGCTGTGGATGGCAGAAGCCCAGAGTGGGACTGGTCAGCTG
CAGGAGCAGAAGAAAGGTCTTCTGATAGCCGTCAGCGTCTCCGTTGATAAAATCATCTCGCATTTCGGGG
CCGCCCGGAACTTGGTGCAGAAGGCCCAGTTGGGTGATAGCCGGCTGAGCCCGGATGTGGGGCACCTGGT
GCTGACCACCCTCTGCCCGGCCCTCCACGCCCTGGTGGCGGACGGGCTGAAGCCTTTCCGGAAGGACCTC
ATCACCGGGCAGCGCAGGAGCAGCCCCTGGAGCGTGGTGGAGGCGTCGGTGAAGCCAGGCTCCAGCACCC
GCTCCCTTGGAACCCTGTATAGCCAGGTCAGCCGTCTAGCCCCGCTGAGCAGCAGCCGTAGCCGCTTCCA
TGCCTTTATCCTGGGCCTCCTCAACACCAAGCAGTTGGAGCTGTGGTTTTCCAGTCTCCAGGAAGATGCA
GGCCTGCTCTCCCTCCTGTACCTGCCAACAGGATTTTTCTCCCTGGCCCGCGGTGGTTGTCCCTCCCTGT
CCACAGAGCTGCTGCTCCTGCTGCAGCCATTGTCGGTGCTCACTTTCCACCTGGACCTGCTCTTTGAGCA
CCACCACCACCTGCCCCTGGGCCCACCTCAGGCCCCTGCCCCTCCAGGCCCACCTCCAGCTCTGCAGCAG
ACTATGCAAGCCATGCTGCACTTTGGGGGCCGGCTGGCCCAGAGCCTTCGGGGGACTTCCAAGGAAGCTG
CTTCAGACCCCTCTGACTCTCCAAACCTTCCCACACCAGGGAGCTGGTGGGAGCAGTTGACCCAGGCCTC
CCGGGTCTATGCCTCTGGGGGCACTGAGGGCTTTCCTCTTTCCCGATGGGCACCGGGGCGTCATGGGACT
GCAGCTGAAGAAGGTGCACAGGAGAGACCCCTGCCCACAGATGAGATGGCACCAGGCAGGGGCCTCTGGT
TGGGAAGACTATTTGGAGTGCCTGGGGGCCCCGCAGAAAATGAGAATGGAGCCCTAAAGTCCAGGAGACC
ATCTAGCTGGCTGCCCCCGACAGTGAGTGTGTTGGCTCTTGTGAAGCGGGGGGCACCTCCCGAGATGCCT
TCTCCTCAGGAGCTTGAGGCCTCAGCACCCAGGATGGTGCAAACCCATAGGGCAGTGCGGGCTCTCTGTG
ATCACACTGCTGCAAGACCTGACCAGTTGAGCTTCCGGCGTGGGGAAGTGCTGCGTGTCATCACCACAGT
GGATGAGGACTGGCTCCGCTGTGGGCGGGATGGCATGGAGGGTCTGGTGCCTGTGGGGTATACCTCCCTT
GTTCTGTAG

Translation (492 aa):
MPPTCSPGLRRQDWAPGRCAGLHLPPRAPSSPALQALAGQAGVRSSWSFAGVPGAQRLWMAEAQSGTGQL
QEQKKGLLIAVSVSVDKIISHFGAARNLVQKAQLGDSRLSPDVGHLVLTTLCPALHALVADGLKPFRKDL
ITGQRRSSPWSVVEASVKPGSSTRSLGTLYSQVSRLAPLSSSRSRFHAFILGLLNTKQLELWFSSLQEDA
GLLSLLYLPTGFFSLARGGCPSLSTELLLLLQPLSVLTFHLDLLFEHHHHLPLGPPQAPAPPGPPPALQQ
TMQAMLHFGGRLAQSLRGTSKEAASDPSDSPNLPTPGSWWEQLTQASRVYASGGTEGFPLSRWAPGRHGT
AAEEGAQERPLPTDEMAPGRGLWLGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMP
SPQELEASAPRMVQTHRAVRALCDHTAARPDQLSFRRGEVLRVITTVDEDWLRCGRDGMEGLVPVGYTSL
VL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH