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Report for CCDS41496.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41496.1 Public Homo sapiens 10 KIAA1217 24 110 108 CCDS HistoryNCBI Gene:56243Re-query CCDS DB by CCDS ID:41496.1Re-query CCDS DB by GeneID:56243See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41496.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376462.5 ENSP00000365645.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376462.5Link to Ensembl Protein Viewer:ENSP00000365645.1Re-query CCDS DB by Nucleotide ID:ENST00000376462Re-query CCDS DB by Protein ID:ENSP00000365645
Original member Current member EBI ENST00000430453.6 ENSP00000389680.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430453.6Link to Ensembl Protein Viewer:ENSP00000389680.3Re-query CCDS DB by Nucleotide ID:ENST00000430453Re-query CCDS DB by Protein ID:ENSP00000389680
Original member Current member NCBI NM_001098500.3 NP_001091970.1 Accepted alive Link to Nucleotide Sequence:NM_001098500.3Link to Protein Sequence:NP_001091970.1Re-query CCDS DB by Nucleotide ID:NM_001098500Re-query CCDS DB by Protein ID:NP_001091970Link to BLAST:NP_001091970.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091970.1 1264 Q5T5P2-9 1264 100% 0 0

Chromosomal Locations for CCDS 41496.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 24219796 24219909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24380869 24381067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24432995 24433193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24438386 24438479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24473228 24474060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24494500 24494604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24495147 24495196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24501379 24501545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24513259 24513434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24520123 24520253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24521782 24521929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24524323 24524764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24527936 24528119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24531830 24531993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24533070 24533237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24544981 24545103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24545827 24546324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3795 nt):
ATGCAAACATCTGAGATGGATCGGAAGAGAGAAGCGTTCCTAGAACATCTGAAGCAGAAGTACCCCCACC
ACGCCTCTGCAATCATGGGTCACCAAGAGAGGCTGAGAGACCAGACAAGGAGCCCCAAACTGTCTCACAG
TCCTCAACCACCCAGTCTGGGTGACCCGGTCGAGCATTTATCAGAGACGTCCGCTGATTCTTTGGAAGCC
ATGTCTGAGGGGGATGCTCCAACCCCTTTTTCCAGAGGCAGCCGGACTCGTGCGAGCCTTCCTGTGGTGA
GGTCAACCAACCAGACGAAAGAAAGATCTCTGGGGGTTCTCTATCTCCAGTATGGAGATGAAACCAAGCA
GCTCAGGATGCCGAATGAAATCACAAGTGCAGACACAATCCGTGCTCTCTTCGTAAGTGCCTTTCCACAG
CAGCTCACCATGAAAATGCTGGAATCGCCCAGTGTCGCCATTTACATCAAAGATGAAAGCAGAAATGTCT
ATTATGAATTAAATGATGTAAGGAACATTCAAGACAGATCACTCCTCAAAGTGTACAACAAGGATCCTGC
ACATGCGTTTAATCACACACCAAAAACTATGAATGGAGACATGAGGATGCAGAGAGAACTTGTTTATGCA
AGAGGAGATGGCCCTGGGGCCCCTCGCCCCGGATCTACTGCTCATCCACCCCATGCGATTCCAAATTCCC
CACCGTCTACTCCAGTGCCCCATTCCATGCCCCCCTCCCCGTCCAGAATTCCTTATGGGGGCACCCGCTC
CATGGTTGTTCCTGGCAATGCCACCATCCCCAGGGACAGAATCTCCAGCCTGCCAGTCTCCAGACCCATC
TCTCCAAGCCCAAGCGCCATTTTAGAAAGAAGAGATGTCAAGCCTGATGAAGACATGAGTGGCAAAAACA
TTGCAATGTACAGAAATGAGGGTTTCTATGCTGATCCTTACCTTTATCACGAGGGACGGATGAGCATAGC
CTCATCCCATGGTGGACACCCACTGGATGTCCCCGACCACATCATTGCATATCACCGCACCGCCATCCGG
TCAGCGAGTGCTTATTGTAACCCCTCAATGCAAGCGGAAATGCATATGGAACAATCACTGTACAGACAGA
AATCAAGGAAATATCCGGATAGCCATTTGCCTACACTGGGCTCCAAAACACCCCCTGCCTCTCCTCACAG
AGTCAGTGACCTGAGGATGATAGACATGCACGCTCACTATAATGCCCACGGCCCCCCTCACACCATGCAG
CCAGACCGGGCCTCTCCGAGCCGCCAGGCCTTTAAAAAGGAGCCAGGCACCTTGGTGTATATAGAAAAGC
CACGGAGCGCTGCAGGATTATCCAGCCTTGTAGACCTCGGCCCTCCTCTAATGGAGAAGCAAGTTTTTGC
CTACAGCACGGCGACAATACCCAAAGACAGAGAGACCAGAGAGAGGATGCAAGCCATGGAGAAACAGATT
GCCAGTTTAACTGGCCTTGTTCAGTCTGCGCTTTTTAAAGGGCCCATTACAAGTTATAGCAAAGATGCGT
CTAGCGAGAAAATGATGAAAACCACAGCCAACAGGAACCACACAGATAGTGCAGGAACGCCCCATGTGTC
TGGTGGGAAGATGCTCAGTGCTCTGGAGTCCACGGTGCCTCCCAGCCAGCCTCCACCTGTGGGCACCTCA
GCCATCCACATGAGCCTGCTTGAGATGAGGCGGAGCGTGGCGGAACTCAGGCTCCAGCTCCAGCAGATGC
GGCAGCTCCAGCTGCAGAACCAGGAGTTGCTGAGGGCAATGATGAAGAAGGCCGAGCTGGAAATCAGTGG
CAAAGTGATGGAAACAATGAAGAGACTGGAGGATCCCGTGCAGCGACAGCGCGTCCTAGTGGAGCAAGAG
AGACAAAAATATCTTCATGAGGAAGAGAAGATCGTCAAGAAGTTGTGCGAGTTGGAAGACTTTGTTGAAG
ACTTGAAGAAGGACTCCACGGCAGCCAGCCGATTGGTTACTCTGAAAGACGTGGAAGACGGGGCTTTCCT
CCTGCGTCAAGTGGGAGAGGCTGTAGCTACCCTGAAAGGAGAATTTCCAACCTTACAAAACAAGATGCGA
GCCATCCTGCGCATAGAAGTGGAGGCCGTGCGGTTTCTGAAGGAGGAGCCACACAAGCTGGACAGTCTCC
TGAAGCGTGTGCGCAGCATGACAGACGTCCTGACCATGCTGCGGAGACATGTCACTGATGGGCTCCTGAA
AGGCACGGACGCAGCCCAAGCCGCACAGTACATGGCTATGGAAAAGGCCACAGCCGCAGAAGTCCTGAAG
AGTCAGGAGGAGGCAGCCCACACCTCCGGCCAGCCCTTCCACAGCACAGGTGCCCCTGGCGATGCGAAGT
CGGAAGTGGTGCCTTTGTCCGGCATGATGGTTCGCCACGCGCAGAGCTCCCCTGTGGTCATCCAGCCCTC
CCAGCACTCCGTGGCCCTGCTGAACCCTGCTCAGAACTTGCCTCACGTGGCCAGCTCCCCAGCCGTCCCC
CAGGAAGCAACCTCCACTCTGCAGATGTCGCAGGCTCCGCAGTCCCCACAGATACCCATGAATGGGTCTG
CCATGCAGAGCTTGTTCATTGAAGAAATCCACAGTGTGAGTGCCAAGAACAGGGCAGTGTCTATCGAGAA
AGCAGAAAAGAAATGGGAGGAAAAAAGGCAAAATCTGGATCACTATAATGGGAAAGAGTTTGAGAAGCTC
CTAGAAGAAGCTCAGGCCAATATCATGAAGTCAATACCAAATCTGGAGATGCCGCCAGCCACAGGCCCAC
TGCCAAGGGGAGATGCCCCAGTGGACAAGGTGGAACTTTCAGAAGATTCTCCAAATTCGGAACAGGACTT
GGAAAAGCTGGGGGGAAAGTCGCCCCCTCCTCCTCCGCCACCTCCTCGTCGAAGCTACCTGCCAGGATCG
GGACTCACCACCACGAGGTCAGGCGATGTGGTCTACACCGGCAGAAAGGAGAACATCACCGCTAAGGCAA
GCAGTGAAGATGCTGGACCAAGCCCACAGACCAGAGCTACAAAATATCCAGCAGAGGAGCCTGCTTCAGC
CTGGACCCCATCCCCACCGCCTGTCACCACCTCCTCCTCAAAGGATGAGGAGGAAGAAGAAGAAGAAGGA
GACAAAATAATGGCAGAACTCCAGGGCTCCAGCGGGGCCCCACAGACGAGCAGGATGCCTGTCCCCATGA
GTGCCAAGAACAGACCCGGAACCCTGGACAAACCCGGCAAGCAGTCCAAACTGCAGGATCCCCGCCAATA
TCGTCAGGCTAATGGAAGTGCTAAGAAATCTGGTGGGGACTTTAAGCCTACTTCCCCCTCCTTACCTGCT
TCTAAGATTCCAGCCCTTTCTCCCAGCTCTGGGAAAAGCAGTTCTCTGCCCTCTTCTAGTGGTGACAGCT
CTAACCTCCCTAATCCACCTGCTACTAAACCATCGATTGCTTCTAACCCTCTCAGCCCCCAAACAGGACC
ACCTGCTCACTCTGCCTCCCTCATCCCTTCTGTCTCTAATGGCTCTTTGAAGTTTCAGAGCCTCACTCAT
ACAGGTAAAGGTCACCATCTTTCATTCTCACCGCAGAGTCAAAATGGCCGAGCACCCCCTCCTTTGTCAT
TTTCCTCCTCCCCTCCTTCTCCTGCCTCCTCCGTCTCACTGAATCAAGGTGCCAAGGGCACCAGGACCAT
CCATACTCCCAGCCTCACCAGCTACAAGGCACAGAATGGAAGTTCAAGCAAAGCCACCCCATCCACAGCA
AAAGAAACCTCTTAA

Translation (1264 aa):
MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHLSETSADSLEA
MSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQ
QLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYA
RGDGPGAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPI
SPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIR
SASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ
PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETRERMQAMEKQI
ASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVGTS
AIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKKAELEISGKVMETMKRLEDPVQRQRVLVEQE
RQKYLHEEEKIVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMR
AILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLK
SQEEAAHTSGQPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP
QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKL
LEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGS
GLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEG
DKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPA
SKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTH
TGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA
KETS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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