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Report for CCDS41588.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41588.1 Public Homo sapiens 11 CRACR2B 24 110 108 CCDS HistoryNCBI Gene:283229Re-query CCDS DB by CCDS ID:41588.1Re-query CCDS DB by GeneID:283229See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41588.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450448.5 ENSP00000409256.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450448.5Link to Ensembl Protein Viewer:ENSP00000409256.1Re-query CCDS DB by Nucleotide ID:ENST00000450448Re-query CCDS DB by Protein ID:ENSP00000409256
Original member Current member EBI ENST00000528542.6 ENSP00000432334.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528542.6Link to Ensembl Protein Viewer:ENSP00000432334.1Re-query CCDS DB by Nucleotide ID:ENST00000528542Re-query CCDS DB by Protein ID:ENSP00000432334
Original member Current member NCBI NM_173584.4 NP_775855.3 Accepted alive Link to Nucleotide Sequence:NM_173584.4Link to Protein Sequence:NP_775855.3Re-query CCDS DB by Nucleotide ID:NM_173584Re-query CCDS DB by Protein ID:NP_775855Link to BLAST:NP_775855.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775855.3 294 Q8N4Y2-3 294 100% 0 0

Chromosomal Locations for CCDS 41588.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 828608 828772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 828852 828963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 829360 829540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 829986 830132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 830250 830337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 830621 830713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 831224 831295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 831535 831561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGGCCAGCCCTGGAAAGCCTGGGGCTGATGAGGCCCAGGAGGAGGAGGGGGAACTCGAGGGGGGCTCTG
CAGGGCCGCGGGCTGCAATACTGGAGCAGGCTGAGGAGCTGTTTCTGCTGTGTGACAAGGAGGCTAAGGG
CTTCATCACCAAGCACGACCTGCAGGGTCTCCAGAGCGACCTGCCCCTCACGCCAGAGCAGCTGGAGGCT
GTGTTTGAAAGTCTGGACCGGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCTGCCTGGGCCTGGGGA
TGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGACCTTTGAGTCGGG
CGGGCTCGACGTGCAGGGCACGGCGGGCTCTCTGGATGAGGAGGAGGAAGAGGAGGAGCGATTCCACACT
GTGCTGGAGCAGCTGGGGGTGGCCCCGGTCCTGGGCAAGCAGCGGGCTGTGAGGACGCTCTGGGCCAGGC
TGCAGCGCGAGCGCCCCGAGCTGCTGGGCTCTTTCGAGGATGTTCTGATACGCGCGTCGGCCTGCCTGGA
GGAGGCGGCCCGGGAGCGCGACGGCCTGGAGCAGGCGCTGCGGAGGCGCGAGAGCGAGCACGAGAGGGAG
GTGCGCGCTCTGTACGAGGAGACGGAGCAGCTTCGGGAGCAGAGCCGGCGCCCGCCGAGTCAGAACTTCG
CCCGCGGGGAGCGGAGAAGCCGTCTGGAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGCGGG
CCTGCGGCAGCGGGAGAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAGCCTGCTACG
GCAACTGGAGCTGCTCAGGGAGCTGAATACACGGCTGCGGGATGA

Translation (294 aa):
MASPGKPGADEAQEEEGELEGGSAGPRAAILEQAEELFLLCDKEAKGFITKHDLQGLQSDLPLTPEQLEA
VFESLDRAHTGFLTAREFCLGLGMFVGVASAQGANPCRTPEETFESGGLDVQGTAGSLDEEEEEEERFHT
VLEQLGVAPVLGKQRAVRTLWARLQRERPELLGSFEDVLIRASACLEEAARERDGLEQALRRRESEHERE
VRALYEETEQLREQSRRPPSQNFARGERRSRLELELQSREQDLERAGLRQRERRGRRLQEHAERESQPAT
ATGAAQGAEYTAAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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