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Report for CCDS41668.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41668.1 Public Homo sapiens 11 SAC3D1 24 110 108 CCDS HistoryNCBI Gene:29901Re-query CCDS DB by CCDS ID:41668.1Re-query CCDS DB by GeneID:29901See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41668.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531072.1 ENSP00000436649.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531072.1Link to Ensembl Protein Viewer:ENSP00000436649.1Re-query CCDS DB by Nucleotide ID:ENST00000531072Re-query CCDS DB by Protein ID:ENSP00000436649
Original member Current member EBI ENST00000652489.1 ENSP00000499090.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000652489.1Link to Ensembl Protein Viewer:ENSP00000499090.1Re-query CCDS DB by Nucleotide ID:ENST00000652489Re-query CCDS DB by Protein ID:ENSP00000499090
Original member Current member NCBI NM_001367485.1 NP_001354414.1 Accepted alive Link to Nucleotide Sequence:NM_001367485.1Link to Protein Sequence:NP_001354414.1Re-query CCDS DB by Nucleotide ID:NM_001367485Re-query CCDS DB by Protein ID:NP_001354414Link to BLAST:NP_001354414.1
Original member Current member NCBI NM_013299.4 NP_037431.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013299.4Link to Protein Sequence:NP_037431.3Re-query CCDS DB by Nucleotide ID:NM_013299Re-query CCDS DB by Protein ID:NP_037431Link to BLAST:NP_037431.3

Chromosomal Locations for CCDS 41668.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65041293 65041866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65044225 65044727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGCCCGGCTGCGAGCTGCCCGTGGGCACCTGCCCGGACATGTGCCCGGCCGCCGAGCGCGCCCAGCGCG
AAAGGGAGCACCGCCTGCACCGCTTGGAGGTGGTGCCGGGTTGCCGCCAGGACCCGCCCCGCGCGGATCC
GCAGCGCGCGGTGAAGGAGTACAGCCGACCCGCCGCCGGCAAGCCCCGGCCCCCGCCCAGCCAGTTGCGT
CCGCCCTCCGTGCTGCTGGCCACCGTGCGCTACCTGGCCGGTGAGGTGGCGGAGAGCGCCGACATCGCCC
GCGCCGAGGTGGCCAGCTTCGTGGCAGACCGCTTGCGAGCTGTGCTCCTGGACCTGGCGCTGCAGGGAGC
GGGCGACGCCGAGGCAGCTGTGGTGCTGGAGGCGGCGCTGGCCACGCTGCTGACCGTAGTGGCGCGGCTC
GGGCCCGACGCGGCGCGGGGACCCGCGGACCCGGTGCTGCTGCAGGCCCAGGTGCAGGAGGGCTTCGGCT
CGCTGCGGCGCTGCTACGCGCGGGGCGCCGGGCCGCACCCCCGCCAACCCGCCTTCCAGGGCCTCTTTCT
GCTCTATAACCTGGGCTCGGTGGAAGCCCTGCATGAGGTTCTACAGCTGCCTGCTGCCCTGCGCGCCTGC
CCGCCCCTCCGCAAGGCCTTGGCGGTAGATGCTGCCTTCCGAGAGGGCAATGCTGCCCGCCTGTTCCGTC
TGCTCCAGACCCTGCCCTACCTGCCAAGTTGCGCTGTGCAGTGCCATGTGGGCCATGCCCGCCGGGAAGC
CCTGGCCCGCTTCGCTCGTGCCTTTAGCACCCCCAAGGGCCAGACCTTGCCTCTGGGCTTCATGGTCAAC
CTCTTGGCCCTGGATGGACTCAGGGAAGCACGGGACCTGTGCCAGGCCCACGGGCTGCCCTTGGACGGAG
AGGAGAGAGTTGTGTTCCTGAGGGGTCGCTACGTGGAGGAAGGGCTACCGCCTGCCAGTACGTGCAAGGT
GTTAGTGGAGAGCAAACTTCGAGGACGTACCCTGGAGGAGGTGGTCATGGCAGAGGAGGAAGATGAGGGC
ACGGACAGACCTGGGTCCCCAGCCTGA

Translation (358 aa):
MPGCELPVGTCPDMCPAAERAQREREHRLHRLEVVPGCRQDPPRADPQRAVKEYSRPAAGKPRPPPSQLR
PPSVLLATVRYLAGEVAESADIARAEVASFVADRLRAVLLDLALQGAGDAEAAVVLEAALATLLTVVARL
GPDAARGPADPVLLQAQVQEGFGSLRRCYARGAGPHPRQPAFQGLFLLYNLGSVEALHEVLQLPAALRAC
PPLRKALAVDAAFREGNAARLFRLLQTLPYLPSCAVQCHVGHARREALARFARAFSTPKGQTLPLGFMVN
LLALDGLREARDLCQAHGLPLDGEERVVFLRGRYVEEGLPPASTCKVLVESKLRGRTLEEVVMAEEEDEG
TDRPGSPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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