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Report for CCDS41814.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41814.1 Public Homo sapiens 12 OSBPL8 24 110 108 CCDS HistoryNCBI Gene:114882Re-query CCDS DB by CCDS ID:41814.1Re-query CCDS DB by GeneID:114882See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41814.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393249.6 ENSP00000376939.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393249.6Link to Ensembl Protein Viewer:ENSP00000376939.2Re-query CCDS DB by Nucleotide ID:ENST00000393249Re-query CCDS DB by Protein ID:ENSP00000376939
Original member Current member EBI ENST00000393250.8 ENSP00000376940.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393250.8Link to Ensembl Protein Viewer:ENSP00000376940.4Re-query CCDS DB by Nucleotide ID:ENST00000393250Re-query CCDS DB by Protein ID:ENSP00000376940
Original member Current member EBI ENST00000611266.4 ENSP00000478240.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611266.4Link to Ensembl Protein Viewer:ENSP00000478240.1Re-query CCDS DB by Nucleotide ID:ENST00000611266Re-query CCDS DB by Protein ID:ENSP00000478240
Original member Current member NCBI NM_001003712.2 NP_001003712.1 Accepted alive Link to Nucleotide Sequence:NM_001003712.2Link to Protein Sequence:NP_001003712.1Re-query CCDS DB by Nucleotide ID:NM_001003712Re-query CCDS DB by Protein ID:NP_001003712Link to BLAST:NP_001003712.1
Original member Current member NCBI NM_001319652.2 NP_001306581.1 Accepted alive Link to Nucleotide Sequence:NM_001319652.2Link to Protein Sequence:NP_001306581.1Re-query CCDS DB by Nucleotide ID:NM_001319652Re-query CCDS DB by Protein ID:NP_001306581Link to BLAST:NP_001306581.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003712.1 847 Q9BZF1-3 847 100% 0 0
NP_001306581.1 847 Q9BZF1-3 847 100% 0 0

Chromosomal Locations for CCDS 41814.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 76355889 76356021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76356626 76356728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76358706 76358811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76369214 76369301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76369637 76369822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76371448 76371584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76373344 76373433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76375273 76375370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76378452 76378550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76384254 76384350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76386168 76386266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76386579 76386660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76389645 76389829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76390420 76390657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76392581 76392752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76394645 76394729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76397694 76397897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76399873 76399974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76402689 76402766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76410564 76410634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76450851 76450941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2544 nt):
ATGAGTCAGCGCCAAGGAAAAGAAGCTTATCCAACGCCAACCAAAGATTTGCATCAGCCATCTCTTAGTC
CAGCAAGTCCTCATAGCCAGGGTTTTGAAAGAGGGAAGGAAGATATTTCTCAAAATAAAGATGAATCTTC
ACTTTCTATGTCAAAGAGCAAGTCTGAATCTAAACTTTATAATGGCTCAGAGAAGGACAGTTCAACTTCA
AGCAAACTCACAAAAAAAGAATCTCTTAAGGTACAAAAGAAAAATTACCGAGAAGAAAAGAAAAGAGCCA
CAAAGGAGCTGCTCAGTACAATCACAGATCCTTCTGTTATTGTTATGGCTGATTGGTTAAAGATTCGTGG
TACTCTAAAGAGCTGGACCAAGTTATGGTGTGTGTTGAAACCTGGGGTGCTACTGATCTATAAAACCCAA
AAAAATGGTCAGTGGGTAGGAACAGTTCTTCTGAATGCCTGTGAAATCATTGAACGTCCATCAAAAAAGG
ATGGCTTTTGTTTCAAACTTTTCCATCCTTTGGAGCAATCTATTTGGGCAGTGAAGGGTCCAAAAGGTGA
AGCGGTTGGATCCATTACTCAACCCTTACCTAGCAGTTATTTGATCATCCGAGCTACTTCAGAGTCAGAT
GGAAGGTGCTGGATGGATGCTTTGGAGTTGGCTTTGAAATGTTCTAGTCTTCTTAAACGTACAATGATCA
GAGAAGGAAAGGAACATGACCTGAGCGTTTCATCAGATAGCACACATGTGACTTTCTATGGCTTACTACG
TGCTAACAATCTCCACAGTGGTGATAACTTCCAGTTAAATGATAGTGAAATTGAACGACAACATTTTAAG
GACCAAGATATGTATTCTGATAAATCTGATAAAGAAAATGATCAAGAACATGATGAGTCTGATAATGAGG
TGATGGGGAAAAGTGAAGAAAGTGACACAGATACATCAGAAAGACAAGATGACTCATATATCGAACCTGA
GCCTGTTGAGCCTTTAAAGGAGACTACCTACACTGAACAGAGCCATGAAGAACTTGGAGAGGCAGGTGAG
GCTTCTCAAACAGAAACTGTATCTGAAGAAAACAAAAGCCTTATCTGGACACTATTGAAACAAGTCCGTC
CTGGCATGGACCTATCCAAGGTGGTTCTGCCTACATTTATTTTGGAACCCCGTTCTTTCCTGGATAAACT
TTCAGATTACTACTATCATGCAGATTTCCTATCTGAGGCAGCTCTTGAAGAAAATCCTTATTTCCGTTTG
AAGAAAGTAGTGAAATGGTATTTGTCAGGATTCTATAAAAAGCCAAAGGGACTGAAGAAACCTTATAATC
CTATACTTGGCGAGACTTTCCGTTGTTTATGGATTCATCCCAGAACAAACAGCAAAACTTTTTATATTGC
TGAACAGGTGTCCCATCATCCACCAATATCTGCCTTTTATGTTAGTAATCGAAAAGATGGATTTTGCCTT
AGCGGTAGTATCCTGGCTAAGTCTAAGTTTTATGGAAACTCATTATCTGCAATATTAGAGGGAGAAGCAC
GGTTAACTTTCTTGAATAGAGGTGAAGATTATGTAATGACAATGCCATACGCTCATTGTAAAGGAATTCT
TTATGGTACAATGACACTGGAGCTTGGTGGAACAGTCAATATTACATGTCAAAAAACTGGATACAGTGCA
ATACTTGAATTTAAACTAAAGCCATTCCTAGGGAGTAGTGACTGTGTTAATCAAATATCAGGGAAACTTA
AACTGGGAAAAGAAGTCCTAGCTACTTTGGAAGGTCATTGGGATAGTGAAGTTTTTATTACTGATAAAAA
GACTGATAATTCAGAGGTTTTCTGGAATCCAACACCTGACATTAAGCAATGGAGATTAATAAGGCACACT
GTAAAATTTGAAGAACAGGGAGATTTTGAATCAGAGAAACTCTGGCAACGGGTAACTCGAGCCATAAATG
CCAAAGACCAAACTGAAGCTACCCAAGAGAAGTATGTTTTGGAAGAAGCTCAAAGACAAGCTGCCAGGGA
TCGGAAAACAAAAAATGAAGAGTGGTCTTGCAAATTATTTGAACTTGATCCACTCACAGGAGAATGGCAT
TACAAGTTTGCAGATACCCGACCATGGGACCCACTTAATGATATGATACAGTTTGAAAAAGATGGTGTTA
TTCAGACCAAAGTGAAACATCGTACTCCAATGGTTAGCGTCCCCAAAATGAAACATAAGCCAACCAGGCA
ACAGAAGAAAGTAGCAAAAGGCTATTCCTCCCCAGAACCTGACATTCAAGACTCCTCTGGAAGTGAAGCT
CAATCAGTAAAACCAAGTACAAGAAGAAAGAAAGGAATAGAACTGGGAGACATTCAGAGTTCCATCGAAT
CTATAAAACAAACACAGGAAGAAATTAAAAGAAATATTATGGCTCTTCGAAATCATTTAGTTTCAAGCAC
ACCGGCCACGGATTATTTTCTGCAACAAAAAGACTACTTCATCATTTTCCTCCTGATTTTGCTTCAAGTC
ATAATAAACTTCATGTTCAAGTAG

Translation (847 aa):
MSQRQGKEAYPTPTKDLHQPSLSPASPHSQGFERGKEDISQNKDESSLSMSKSKSESKLYNGSEKDSSTS
SKLTKKESLKVQKKNYREEKKRATKELLSTITDPSVIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQ
KNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESD
GRCWMDALELALKCSSLLKRTMIREGKEHDLSVSSDSTHVTFYGLLRANNLHSGDNFQLNDSEIERQHFK
DQDMYSDKSDKENDQEHDESDNEVMGKSEESDTDTSERQDDSYIEPEPVEPLKETTYTEQSHEELGEAGE
ASQTETVSEENKSLIWTLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDYYYHADFLSEAALEENPYFRL
KKVVKWYLSGFYKKPKGLKKPYNPILGETFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCL
SGSILAKSKFYGNSLSAILEGEARLTFLNRGEDYVMTMPYAHCKGILYGTMTLELGGTVNITCQKTGYSA
ILEFKLKPFLGSSDCVNQISGKLKLGKEVLATLEGHWDSEVFITDKKTDNSEVFWNPTPDIKQWRLIRHT
VKFEEQGDFESEKLWQRVTRAINAKDQTEATQEKYVLEEAQRQAARDRKTKNEEWSCKLFELDPLTGEWH
YKFADTRPWDPLNDMIQFEKDGVIQTKVKHRTPMVSVPKMKHKPTRQQKKVAKGYSSPEPDIQDSSGSEA
QSVKPSTRRKKGIELGDIQSSIESIKQTQEEIKRNIMALRNHLVSSTPATDYFLQQKDYFIIFLLILLQV
IINFMFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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