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Report for CCDS41927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41927.1 Public Homo sapiens 14 DHRS2 24 110 108 CCDS HistoryNCBI Gene:10202Re-query CCDS DB by CCDS ID:41927.1Re-query CCDS DB by GeneID:10202See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41927.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344777.11 ENSP00000344674.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344777.11Link to Ensembl Protein Viewer:ENSP00000344674.7Re-query CCDS DB by Nucleotide ID:ENST00000344777Re-query CCDS DB by Protein ID:ENSP00000344674
Original member Current member EBI ENST00000611765.4 ENSP00000481607.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611765.4Link to Ensembl Protein Viewer:ENSP00000481607.1Re-query CCDS DB by Nucleotide ID:ENST00000611765Re-query CCDS DB by Protein ID:ENSP00000481607
Original member Current member NCBI NM_182908.5 NP_878912.1 Accepted alive Link to Nucleotide Sequence:NM_182908.5Link to Protein Sequence:NP_878912.1Re-query CCDS DB by Nucleotide ID:NM_182908Re-query CCDS DB by Protein ID:NP_878912Link to BLAST:NP_878912.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_878912.1 300 Q13268-2 300 100% 0 0

Chromosomal Locations for CCDS 41927.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 23638865 23639004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23639179 23639356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23639794 23639895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23643152 23643219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23644111 23644162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23644409 23644554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23644827 23644882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23645142 23645302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (903 nt):
ATGCTGTCAGCAGTTGCCCGGGGCTACCAGGGCTGGTTTCATCCCTGTGCTAGGCTTTCTGTGAGGATGA
GCAGCACCGGGATAGACAGGAAGGGCGTCCTGGCTAACCGGGTAGCCGTGGTCACGGGGTCCACCAGTGG
GATCGGCTTTGCCATCGCCCGACGTCTGGCCCGGGACGGGGCCCACGTGGTCATCAGCAGCCGGAAGCAG
CAGAACGTGGACCGGGCCATGGCCAAGCTGCAGGGGGAGGGGCTGAGTGTGGCGGGCATTGTGTGCCACG
TGGGGAAGGCTGAGGACCGGGAGCAGCTGGTGGCCAAGGCCCTGGAGCACTGTGGGGGCGTCGACTTCCT
GGTGTGCAGCGCAGGGGTCAACCCTCTGGTAGGGAGCACTCTGGGGACCAGTGAGCAGATCTGGGACAAG
ATCCTAAGTGTGAACGTGAAGTCCCCAGCCCTGCTGCTGAGCCAGTTGCTGCCCTACATGGAGAACAGGA
GGGGTGCTGTCATCCTGGTCTCTTCCATTGCAGCTTATAATCCAGTAGTGGCGCTGGGTGTCTACAATGT
CAGCAAGACAGCGCTGCTGGGTCTCACTAGAACACTGGCATTGGAGCTGGCCCCCAAGGACATCCGGGTA
AACTGCGTGGTTCCAGGAATTATCAAAACTGACTTCAGCAAAGTGGTGAGGATTGGTTTCATGGGAATGA
GTCTCTCTGGAAGAACTTCAAGGAACATCATCAGCTGCAGAGGATTGGGGAGTCAGAGGACTGTGCAGGA
ATCGTGTCCTTCCTGTGCTCTCCAGATGCCAGCTACGTCAACGGGGAGAACATTGCGGTGGCAGGCTACT
CCACTCGGCTCTGAGAGGAGTGGGGGCGGCTGCGTAGCTGTGGTCCCAGGCCCAGGAGCCTGA

Translation (300 aa):
MLSAVARGYQGWFHPCARLSVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQ
QNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDK
ILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRV
NCVVPGIIKTDFSKVVRIGFMGMSLSGRTSRNIISCRGLGSQRTVQESCPSCALQMPATSTGRTLRWQAT
PLGSERSGGGCVAVVPGPGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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